LOC118943608


Basic Information

Item Value
gene id LOC118943608
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 38911464 ~ 38913545 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959287.1
AGTCAAGATGGAGgcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggggagagccaagctggaggcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggggagagccaagctggaggcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggggagttccaagatggaggcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggggagagccaagctggaggcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggggagagccaagctggaggcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgggGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgtgGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgggGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgtgGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggggagttccaagatggaggcatggtggcttcaacacaatggtgtgGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgtgGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgtgGGAGTTCCAAGATGGAGGCATGGTGGCTTCAACACGATGGTGTGGGAGTTCCAAGCTGGAGgcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggggagttccaagatggaggcatggtggcttcaacacaatggtgtgGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgtgGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgtgGGAGTTCCAAGATGGAGGCATGGTGGCTTCAACACGATGGTGTGGGAGTTCCAAGCTGGAGgcatggtggcttcaacacaatggtgtgGGAGTTCCAAGCTGGAGGCATGGTGGCTTCAACACGATGGTGGGGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgtgggagagccaagatggaggcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGGCATGGTGGCTTCAACACGATGGTGTGGGAGTTCCAAGATGGAGAcatggtggcttcaacacaatggtgggggagagccaagctggaggcatggtggcttcaacacaatggtgggGGAGTTCCAAGATGGAGACATGGTGGCTTCAACACGATGGTGTGGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgtgGGAGAGCCAAGCTGGAGgcatggtggcttcaacacaatggtgggggagttccaagatggaggcatggtggcttcaacacaatggtgggggagttccaagatggaggcatggtggcttcaacacaatggtgggGGAGTTCCAAGATGGAGGCATTGTGGCTTCAACACATCACCCCTAATTAGTAATCTAGTGTGTATATTTAAATCATTGGGCTCAGCATCTGCTCTGACCAACAACTGTCTGTCATGTGCGCGCAAAGAAATAGATCATGCTGCAGGCAGC

Function

NR:

description
uncharacterized protein LOC111609315

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959287.1 True 1950 mRNA 0.54 2 38911464 38913545

Neighbor

gene id symbol gene type direction distance location
ccnyl1 LOC106582379 coding downstream 18723 38874414 ~ 38892741 (-)
LOC110502145 LOC106586333 coding downstream 184868 38520872 ~ 38726596 (-)
LOC110501850 dbr1 coding downstream 419969 38485821 ~ 38491495 (-)
LOC110501846 NA coding downstream 438980 38467191 ~ 38472484 (-)
LOC110501845 LOC106582367 coding downstream 460721 38438184 ~ 38450743 (-)
LOC118943609 NA coding upstream 64962 38975839 ~ 38989602 (-)
klf7b klf7 coding upstream 85137 38998682 ~ 39154770 (-)
LOC110502146 LOC106582388 coding upstream 516127 39429672 ~ 39436466 (-)
LOC118943588 NA coding upstream 523654 39437199 ~ 39441516 (-)
ramp1 LOC106582391 coding upstream 676484 39590029 ~ 39680169 (-)
G1808063 NA non-coding downstream 44291 38866970 ~ 38867173 (-)
G1808062 NA non-coding downstream 44707 38866557 ~ 38866757 (-)
G1808061 NA non-coding downstream 48343 38862688 ~ 38863121 (-)
G1808056 NA non-coding downstream 68183 38840902 ~ 38843281 (-)
G1808054 NA non-coding downstream 71808 38838994 ~ 38839656 (-)
G1808284 NA non-coding upstream 1703 38915248 ~ 38917152 (-)
G1808297 NA non-coding upstream 27447 38940992 ~ 38941210 (-)
G1808302 NA non-coding upstream 38685 38952230 ~ 38952558 (-)
G1808343 NA non-coding upstream 145558 39059103 ~ 39059436 (-)
G1807731 NA other downstream 698277 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 716368 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 1151216 37759971 ~ 37760248 (-)
G1806449 NA other downstream 1798990 37043561 ~ 37112474 (-)
G1808299 NA other upstream 30591 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 1823103 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 2534354 41447899 ~ 41523764 (-)
G1811042 NA other upstream 2691429 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 3473277 42386822 ~ 42389273 (-)

Expression


Co-expression Network