LOC118943588


Basic Information

Item Value
gene id LOC118943588
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 39437199 ~ 39441516 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959076.1
atggagatcCCACGAGAGTACACCCACGGTCATGCGGAGTACACCCACGGTCATGCGGAGTACACCCACGGTCATGCGGACTACACCCACGGCCATGCGGAGTACACCCACGGTCATGCGGAGTACACTCACGGCCATGCGGAGTACACCCACGGTCATGCGGAGTACACCCACGGTCATGCGGAGTACACCCACGGTCATGCAGAGTACACCCACGTGCCCCCTAGTGGCGTGTCCATCATGAATCATCCGGTGATGCTGAGGTGTCGGTGGAGAGTACACCCACGGTCATGCGAAGTACACCCACGGCCATGCAGAGAACACCCACGGCCATGCAGAGTACACCCACAGCAATGCGAGTACACCCACAGCAATGCGGAGTACACCCACAGCAATGCGGAGTACACCCACAGCAATGCGGAGTACACCCACAGACATGCGGAGTACACCCACAGCAATGCGGAGTACACCCACAGCAATGCGGAGTACACCCACAGACATGCGGAGTACACCCACGGCCATGCTGAGGTGTCGGTGGTGAGCGGTGACCCTGGCCAGGCtgaggatgaaggggaggagggggctgCTGGTCAAACAGGACATCCTGATAGAGAGTCACCCCAACAGGACGCTCAGTGTGAAACCCCCCCCAGCCTCCGTATGGACCAGCTGCACTGGCAGTGTGTGGTGTTCAGAGGGCTTGTTCAGAGCGACAGCCTCCCTGACCTCACAATGCCCACACAGACAACAGTGTCTTCAATGACAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCCCCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCCCCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCCCCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGCTCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGTCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCCCCGCTGCCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACTGACATCCACAACATCACCGCTGTCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCCCCGCTGCCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGTCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGTCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACCGCTGGCCAGAACCACCTGTTCACACCCCCATCACCAACATCCACAACATCACGCCCACACACTTTTAACATTTAG

Function

NR:

description
mitochondrial ribonuclease P protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959076.1 True 1839 mRNA 0.57 5 39437199 39441516

Neighbor

gene id symbol gene type direction distance location
LOC110502146 LOC106582388 coding downstream 733 39429672 ~ 39436466 (-)
klf7b klf7 coding downstream 282429 38998682 ~ 39154770 (-)
LOC118943609 NA coding downstream 457173 38975839 ~ 38989602 (-)
LOC110501854 LOC106582380 coding downstream 507458 38899484 ~ 38929741 (-)
LOC118943608 NA coding downstream 523654 38911464 ~ 38913545 (-)
ramp1 LOC106582391 coding upstream 148513 39590029 ~ 39680169 (-)
LOC110501861 LOC106582392 coding upstream 241704 39683220 ~ 39731114 (-)
LOC110502147 LOC106582393 coding upstream 294913 39736429 ~ 39847997 (-)
tmem177 tm177 coding upstream 409339 39850855 ~ 39853369 (-)
LOC110501865 LOC106582395 coding upstream 518915 39960431 ~ 40027153 (-)
G1808510 NA non-coding downstream 63826 39373168 ~ 39373373 (-)
G1808482 NA non-coding downstream 91157 39345841 ~ 39346042 (-)
G1808451 NA non-coding downstream 126710 39310257 ~ 39310489 (-)
G1808385 NA non-coding downstream 207343 39166420 ~ 39229856 (-)
G1808367 NA non-coding downstream 313645 39108339 ~ 39123554 (-)
G1808627 NA non-coding upstream 10050 39451566 ~ 39452483 (-)
G1808628 NA non-coding upstream 13005 39454521 ~ 39455134 (-)
G1808911 NA non-coding upstream 132964 39574480 ~ 39575918 (-)
G1808969 NA non-coding upstream 259692 39701208 ~ 39702525 (-)
G1809004 NA non-coding upstream 311473 39752989 ~ 39753230 (-)
G1808299 NA other downstream 492669 38944136 ~ 38944530 (-)
LOC110502145 LOC106586333 other downstream 824912 38520872 ~ 38726596 (-)
G1807731 NA other downstream 1224012 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 1242103 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 1676951 37759971 ~ 37760248 (-)
LOC110501878 LOC106582406 other upstream 1295132 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 2006383 41447899 ~ 41523764 (-)
G1811042 NA other upstream 2163458 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 2945306 42386822 ~ 42389273 (-)
LOC110502155 psd12 other upstream 3163187 42603998 ~ 42605768 (-)

Expression


Co-expression Network