ramp1 (LOC106582391)


Basic Information

Item Value
gene id ramp1
gene name LOC106582391
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 39590029 ~ 39680169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579710.2
GGCTCTCTCACGGACTCTCTGTTGGTGTCAGTCAAGAGAACGCACGCTCGAGACCCAGCAGTTCACTGGCGGCTCTACTCTGGCTCAGTATGTTTCGCTTGCGCATGGTTGGTTGGAGTTGCCAAGTATGTCCTCGTAGTGTACGCAATGTTTTTGGACTCTAATGGAACTTACCATTTGTTGAATTGTCAAGACTCGATGTTGGTTGCATATTTATTTAAATGATAGCGAATCTATTTCGTAAAGAAAGCTGGCGGGATAGGTTACTCCGAAAGCAAAACTCCCGACGACCCGAACCAAGTGTATCTCTTCCGAGTTTTTGCGCAAGGTGATAGTGACGGTGACGACAGTTGAGCTGCCTTTATAGTTGGTTGAGAGGAACGAGTCGAATGCTTATGGATTACAACTCTGTGATTCTGTGACAGGGTCGTCTCTTAGTGGATACATTAGGGAGGAGAATTGTGACGCTTTTATCGTCTGTTTCATCTTAACGCTTCTCCAACTTCTTGCATTGGATAGTCGTTTTTAAAGAAGACCATGACATCGGATACCACACCAGTGTTTTCGAAACAGGTGCTCCTGTGGCTGGTTGTAGtgtGCCAGTCTGTGTCGGTGATGGCGTGCAGCGGGACCTATGAGTACGTCATCGAGGAGTTCTGTCTGGGGAAATTCAGACTGGACATGGAGGAACTGGACCAGCATCGCTGGTGCAGCTGGGAGGACACAGTGGAACCTTACGGTGAGCTCACCAACTGCACCTACCTGATCGCCCTGAAGATGGACTGTTTCTGGCCCAACCGGCTGGTGGACGAGTTCTTCATCCGCATCCACAAGCACTACTTCCACGACTGCTCCCTGTCGGGACGGCTGCTGCGTGATCCGCCCAACCGTATCCTTGGGCCATTCATCGTGGTGCCCATCCTTGTCACGTTGCTCATGACTGCCCTAGTGGTGTGGAGGAGCAAACGCAGTGAAGGCATGGTGTAGCCAGGCCCAACCTCCAGGCCACCAGCCAGGGAGAAGAGGTCCAGAGGAGGCCCccttcacctccacctccacccatgACAGACTCAGATACACATAACACTGCTGCTACCTACTACAGAACAGACATCATGGACCAGGTGAGGGACTGGGAGGACTGTCTAAGCCTGTCTCAAGGATAACATTATAGAGCATCTCTGGTCCTATCACTGTTTGATAGGAGACCGAGCTAGAGGCACAGGATATAGGAAAGTACACGGACTACAAGATGAGAGTTCATATAACTACAGTGATTATACCCTGCAGACGGACTGGTTTAAAAATGGAAGAGTGATTCCATTGCCCTTTATCTACTAAATCCAATCTGGCTGGAGAATCACAAGCTGTTTGCCATGAAGGACAGATGGTGTCTGATTGGTTTGAAGGACTTCCTGGACACATTAGGTAATTTCCTGTGCAGTGAGTTGAGACACTTTGGCACAGCTCCTGGAGTGGACTTCTTACAGTCAGTCACTGATTGGTTGATATAAAGCATCGTCCTATCATCTCTGTGCTTTATGGATGTTGTCTGTGCACTCTGTACTCTCCTCAAACACTGTTTGGTCCCCCCTGTTCCTGTCCTTGCCCGTCAGAACCAACAGATTTCCACACTCACCCTTCAAGTCCTTACTTTGTGTACTGTGCCAAAGTACCTGTCAGTAACCAAAATAATTACAaaaatattcaaatcaaatgtgtcCATGAATAGAAAGTGAATGTGAAAAAGAGAATATTATTTTATGTGTGCGAGACTGAGGTACAACATACTGTGCAAATGATGGATTAATAGCCTCCTGTTGGTATTTCATAATGACTGTGTTCAATAAACTTGGATTAAAAACAAA

Function

NR:

description
receptor activity-modifying protein 1-like

GO: NA

KEGG:

id description
K08447 RAMP1; receptor activity modifying protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579710.2 True 1868 mRNA 0.47 3 39590029 39680169

Neighbor

gene id symbol gene type direction distance location
LOC118943588 NA coding downstream 148513 39437199 ~ 39441516 (-)
LOC110502146 LOC106582388 coding downstream 153563 39429672 ~ 39436466 (-)
klf7b klf7 coding downstream 435259 38998682 ~ 39154770 (-)
LOC118943609 NA coding downstream 610003 38975839 ~ 38989602 (-)
LOC110501854 LOC106582380 coding downstream 660288 38899484 ~ 38929741 (-)
LOC110501861 LOC106582392 coding upstream 3051 39683220 ~ 39731114 (-)
LOC110502147 LOC106582393 coding upstream 56260 39736429 ~ 39847997 (-)
tmem177 tm177 coding upstream 170686 39850855 ~ 39853369 (-)
LOC110501865 LOC106582395 coding upstream 280262 39960431 ~ 40027153 (-)
LOC110501866 LOC106582396 coding upstream 404288 40084457 ~ 40170141 (-)
G1808911 NA non-coding downstream 14111 39574480 ~ 39575918 (-)
G1808628 NA non-coding downstream 134895 39454521 ~ 39455134 (-)
G1808627 NA non-coding downstream 137546 39451566 ~ 39452483 (-)
G1808510 NA non-coding downstream 216656 39373168 ~ 39373373 (-)
G1808482 NA non-coding downstream 243987 39345841 ~ 39346042 (-)
G1808969 NA non-coding upstream 21039 39701208 ~ 39702525 (-)
G1809004 NA non-coding upstream 72820 39752989 ~ 39753230 (-)
G1809012 NA non-coding upstream 90278 39770447 ~ 39770812 (-)
G1809034 NA non-coding upstream 129152 39809321 ~ 39810000 (-)
G1809065 NA non-coding upstream 196782 39876951 ~ 39877280 (-)
G1808299 NA other downstream 645499 38944136 ~ 38944530 (-)
LOC110502145 LOC106586333 other downstream 977742 38520872 ~ 38726596 (-)
G1807731 NA other downstream 1376842 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 1394933 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 1829781 37759971 ~ 37760248 (-)
LOC110501878 LOC106582406 other upstream 1056479 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 1767730 41447899 ~ 41523764 (-)
G1811042 NA other upstream 1924805 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 2706653 42386822 ~ 42389273 (-)
LOC110502155 psd12 other upstream 2924534 42603998 ~ 42605768 (-)

Expression


Co-expression Network