LOC110502151 (arl4c)


Basic Information

Item Value
gene id LOC110502151
gene name arl4c
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 41612562 ~ 41613136 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110502151
ATGGGCAACAGTTTCTCCAACATATCTGCTTTCCAATCACTACACATCGTGATGTTGGGTTTGGATTCAGCTGGCAAAACGACTGTTCTTTAGCAATTCGATTCAACACTGAGAAAATCAAACTGAGTAATGGTACCGCGAAGGGGATCAGTTGTCACTTCTGGGACGTCGGAGGTCAGGAGAAGCTGCGGCCCCTGTGGAAATCCTACAGTCGGGGCACGGACGGCATCATTTATGTGGTGGACTCAGTGGACGTTGACCGGTTGGAGGAGGCTAAAACAGAACTGCATAAAGTCACAAAATTCGCAGAGAACCAGGGGACACCTCTTCTGGTGATAGCCAACAAGCAGGACCTGCCTAAATCTCTTCCAGTCGCAGACATTGAAAAACAGCTGGCTCTCCACGAGCTCACTCCATCCACCTCATACCACGTCCAACCTTGCTGCGCCATCATTGGCGAGGGACTTCACGAGGGTATGGACAAACTATATGAGATGATAGTAAAGCGGAGAAAATCTTTAAAGCAAAAGAAGAAACGATAACGACCGCCCATGTGTCGTAACCtatatggacaa

Function

symbol description
arl4c Enables alpha-tubulin binding activity. Involved in endocytic recycling. Located in cytosol and plasma membrane.

NR:

description
ADP-ribosylation factor-like protein 4C

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110502151 True 575 mRNA 0.48 1 41612562 41613136

Neighbor

gene id symbol gene type direction distance location
LOC110501886 rhg15 coding downstream 88798 41447899 ~ 41523764 (-)
LOC118943638 NA coding downstream 165290 41439948 ~ 41447272 (-)
LOC110501883 LOC106582410 coding downstream 561075 40992915 ~ 41051487 (-)
LOC110501882 LOC106582411 coding downstream 624351 40942404 ~ 40988211 (-)
LOC110501881 LOC106582412 coding downstream 670582 40930259 ~ 40941980 (-)
LOC110501887 LOC106582419 coding upstream 9685 41622821 ~ 41624796 (-)
LOC110501888 LOC106582420 coding upstream 55760 41668896 ~ 41743824 (-)
LOC110502131 LOC106582415 coding upstream 151827 41764963 ~ 41767178 (-)
LOC110502152 LOC106582422 coding upstream 185318 41798454 ~ 41899740 (-)
LOC110501896 LOC106582434 coding upstream 979082 42592218 ~ 42603449 (-)
G1811025 NA non-coding downstream 22064 41589230 ~ 41590498 (-)
G1810940 NA non-coding downstream 158975 41449902 ~ 41453587 (-)
G1810926 NA non-coding downstream 181532 41430763 ~ 41431030 (-)
G1810912 NA non-coding downstream 200863 41411476 ~ 41411699 (-)
G1810911 NA non-coding downstream 202474 41409402 ~ 41410088 (-)
G1811165 NA non-coding upstream 29633 41642769 ~ 41642992 (-)
G1811169 NA non-coding upstream 32866 41646002 ~ 41646266 (-)
G1811240 NA non-coding upstream 151491 41764627 ~ 41764828 (-)
G1811279 NA non-coding upstream 179298 41792434 ~ 41792652 (-)
G1811414 NA non-coding upstream 279413 41892549 ~ 41892759 (-)
G1811042 NA other downstream 7331 41604974 ~ 41605231 (-)
LOC110501878 LOC106582406 other downstream 799175 40736648 ~ 40813437 (-)
G1808299 NA other downstream 2668032 38944136 ~ 38944530 (-)
LOC110502145 LOC106586333 other downstream 3000275 38520872 ~ 38726596 (-)
G1812079 LOC106582433 other upstream 773686 42386822 ~ 42389273 (-)
LOC110502155 psd12 other upstream 991567 42603998 ~ 42605768 (-)
G1812404 NA other upstream 1064121 42677257 ~ 42677760 (-)
LOC110502171 LOC106582464 other upstream 2897271 44473683 ~ 44553607 (-)
G1814480 NA other upstream 3060311 44673447 ~ 44673888 (-)

Expression


Co-expression Network