LOC110501995 (hnmt)


Basic Information

Item Value
gene id LOC110501995
gene name hnmt
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 47042225 ~ 47061327 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579869.2
CAGACCAGTACTGTGCATACAGACAGTCTGTCTAGTTATATTATTGGGGACAGAGTCCACCCTGccagagggagcgagggagggctTTCAGGTCTACTCAGGAAGGCTTCTCATTTCTCTGTACACTACGGCAAGGCAATCAATGCTTCTCACGGCTGCAGCCATGAACACTATGAAGCCAGCGGGGTACGAGGGCCGTTATGTTCAGGGGTTCCAGTTTTACTTGAAACACTCGGAGGAACACAAGGCCATCCTTGGGTATGTCGACAAGGTTCTCCCTGGAGAGTTCACCAGAATTGGAGAGgggaaatccaaaatggatgttCTAGGTGTTGGAAGTGGTGGCGGGGAGATGGATGCCCATATCCTGTCTATTCTACAGTCTAAACTGCCAGCCACCCCTCTTACTGCAGACATAGTGGAACCCAGCATCCAACTCACTGACAATTTCAAAGCGTTAGTGAAAAAGACTCCCAGCCTTCAGAAGATCCCGTTCTCTTGGCACACCGTGACGTGTGGAGAATATGAGAAACAGGTCAAAGACAAAAGAGAGATCAAAAGATTTGACTTCATTCACATGATTCAGATGTTATACTACGTAGATGACTATCCAGGAAccatcaagttcttccacaatcTTCTGAAGGAAAACAGCAAACTGCTCATAGTTCATGAAGCAGCTGGCAGCGGCTGGGACACCCTGTGGAAGACCTACAGGAAAGAGCTCTGCACCAAGTCCATCTCTGACTACATGTCTGCTGGAGACATCAAGGTTCACCTGGAGCGGCTGGAGCTTAAGTATGATGAGCACCTCATCCCTAACACCCTGGACATCACAGACTGCTTCACTGATGGGGATGAGATGGGAGAGCTGCTGCTGGACTTCATGACAGAACAGGACCACTTCCACCAGTCTCTGACCCCTGATCTTAGAGCAAGCATCCTGGACCTTCTCCGGAATCGATGTAGCACAGAGAAAGAGGGCAGGATACTGTTCGACTGCAGCTTGAGTTGTCTCCTGGTTTACTCCTGAACCATGTGTGGTGTTTAATGAGAGTGCCCAGAGTCATACTGTACACAGTATATGGCTCTGAGTTTGTCTATGTTCATTCATTATCACCTGGCTAAGTGGCTAGAGTGCACTATGTAGCAAAGGCTATACCTATATATCTTCTACAATACAGCATGTTAGCTTTCTATCTTCAAACCAAATTGTTTTTCAGTGTTTTCAATAAAAGTGCCCTGTCATTCTTTCAAA

Function

symbol description
hnmt Predicted to enable histamine N-methyltransferase activity. Predicted to be involved in histamine catabolic process and methylation. Predicted to be located in cytoplasm. Is expressed in adaxial cell and muscle pioneer. Human ortholog(s) of this gene implicated in Parkinson's disease; asthma; atopic dermatitis; autosomal recessive non-syndromic intellectual disability; and essential tremor. Orthologous to human HNMT (histamine N-methyltransferase).

NR:

description
histamine N-methyltransferase-like

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0046539 histamine N-methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579869.2 True 1258 mRNA 0.47 7 47042225 47061327

Neighbor

gene id symbol gene type direction distance location
spopla spopl coding downstream 68093 46869775 ~ 46974132 (-)
ints6 LOC106582497 coding downstream 885253 46119388 ~ 46156972 (-)
LOC118943596 NA coding downstream 1013719 46011115 ~ 46028506 (-)
LOC110501932 LOC106582487 coding downstream 1315831 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 1454513 45582551 ~ 45587712 (-)
LOC110501994 hnmt coding upstream 25544 47086871 ~ 47103828 (-)
trpm2 LOC106582587 coding upstream 109076 47170403 ~ 47260466 (-)
cfap65 cfap65 coding upstream 416301 47476398 ~ 47553609 (-)
LOC110501961 LOC106582505 coding upstream 567553 47628880 ~ 47635640 (-)
ptprna LOC106582506 coding upstream 671892 47733219 ~ 47834254 (-)
G1816692 NA non-coding downstream 3470 47038494 ~ 47038755 (-)
G1816691 NA non-coding downstream 4060 47037315 ~ 47038165 (-)
G1816679 NA non-coding downstream 19404 47021114 ~ 47022821 (-)
G1816675 NA non-coding downstream 23965 47016526 ~ 47018260 (-)
G1816660 NA non-coding downstream 47221 46994708 ~ 46995004 (-)
G1816735 NA non-coding upstream 24108 47085435 ~ 47085923 (-)
G1816770 LOC106583892 non-coding upstream 49218 47110545 ~ 47111662 (-)
G1816774 NA non-coding upstream 53414 47114741 ~ 47114943 (-)
G1816786 NA non-coding upstream 57124 47118451 ~ 47168499 (-)
G1815615 LOC106582489 other downstream 1201243 45838750 ~ 45840982 (-)
G1814480 NA other downstream 2368337 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 2488805 44473683 ~ 44553607 (-)
G1812404 NA other downstream 4364465 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 4437205 42603998 ~ 42605768 (-)
G1816841 NA other upstream 164224 47225551 ~ 47226646 (-)
G1816929 NA other upstream 339795 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 409967 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 1000722 48057851 ~ 48064453 (-)
G1817668 NA other upstream 1207460 48268787 ~ 48291496 (-)

Expression


Co-expression Network