G1765911


Basic Information

Item Value
gene id G1765911
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 3012591 ~ 3014779 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2022804
gatttatcggtggtgaccatgttacctagtctcagtgcagtgggcagctgggaggaggtgctcttgttctccatggacttcacagtgtcccagaactttttggagttggagctacaggatgcaaacttctgcctgaagaagttggctttagctttcctgactgactgtgtgtattggttcctgacttccctgaacagttgcatatcgcggggactattcgatgttagcgcagtccgccacaggatgtttttgtgctgATCGGTCATTCGGTGCCTGAGGAgtagcgtttttttttttttattcacaaaATTCTAAATTGAGGAAAAATCATCATGGCAGACCTTATAGCACCCTGAGGCAAATTCTTTCCTTGTGAGGAGAGGGACCTATGTCCTGAATTTCATGACTTTAGGTCAAATGGGGTTAGCGGTGTGACCATACAAAGATTGCATTTTAATTTGCTTGTTATAGCGCCACCATCTGGACAATCAGTGTACTTTTGTAAATTACTGATCTCTACATTCAATAAGTTTTGTCCAAATCTGGCCAGTGCCATTTGagatattgcatgtaacaaacatactaacagacggagacagatccagagtcccccctccccttcccgATTTCATTGTGGGGGTCATTTGTCCTTATAACTTCttctgtgtgtgattttaaaacaattgGTTCAAGGAaTCGCGGTCGGCCTTGAACTTtgtggcttcaatgagagggggcagtcgtTCTCCCCTGGTTTGGTGGCTCACAAGAACatcaaaaaagggtcaatgcctCAATGCAAAGTTTTGGAAAACTGATTTTAGAGTCCCATTGACATCTGTACTTTTCCATGTTGATGTTTTTCTATGCAGGAAGTTTTTTATAGTGTCCATTAAACAGAACCTCTGTGGTACCCTGTCACGACAACCTTTGATTAGCATCACTGTCCTTTTAGTTGTGAATGTCAGGGAGTGTTTATCGGGAAATACAAAATGAGAGTCATATAAATGATCAAGTCTACAAGCTACAGGACATTGTGTCATCTTGCTATTATATCGTTTTAGGAGATTATTTTATTACAATATAATTATACAATACCACACCAAAACAATGGATACATATTAATTGTATGTTGTTGCTATAACTTTAATTTATGAAATATGATGATTGAAATGCTTGAACTTTATAGCTATAGTTCCGTGTGATTCCCCTGTTGTCTTTGTTAATTGTGCCTCTCCCAGTCTCCAGTGTTTCATTGTACACTTACTGTCAGTTTGCTTATAACCACTTAATTCTATTCAAATCCAGGTTTCATGTTCTGTAGTAGAACAACCCAAAGGAAAATAGTTATAATTAAAGGGTGAAAGGAAATATGTTGGTACATGACTGTGAATGTTCTTTCAGATTAAATTAATTTATGTGTGGGCAAAAATATCAGATATATTTTATAAACTCTAGCATATAAATCCATTTTGGTTTGTTTGTACAGTATTGCATAATTTCAAATAAAGGCCTTTTGGCACcaacagtgagctccaaaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2022804 True 1543 lncRNA 0.39 3 3012591 3014779

Neighbor

gene id symbol gene type direction distance location
tmtc4 tmtc4 coding downstream 61731 2899826 ~ 2950860 (-)
zic5 zic5 coding downstream 523531 2484121 ~ 2489060 (-)
LOC110501251 NA coding downstream 545659 2442459 ~ 2466932 (-)
gpr183a ebi2 coding downstream 969821 2016068 ~ 2042770 (-)
gpr18 gpr18 coding downstream 999529 2007954 ~ 2013062 (-)
nalcn nalcn coding upstream 2071 3016850 ~ 3312040 (-)
LOC118943626 NA coding upstream 173318 3188097 ~ 3190294 (-)
fgf14 fgf14 coding upstream 436596 3447431 ~ 3774567 (-)
shox shox coding upstream 1267199 4281978 ~ 4294159 (-)
si:ch211-269e2.1 LOC106581653 coding upstream 1547444 4562223 ~ 4609211 (-)
G1765910 NA non-coding downstream 516 3010959 ~ 3012075 (-)
G1765869 NA non-coding downstream 65738 2944931 ~ 2946853 (-)
G1765841 NA non-coding downstream 137474 2874740 ~ 2875117 (-)
G1765834 NA non-coding downstream 153849 2858491 ~ 2858742 (-)
G1765833 NA non-coding downstream 156493 2855898 ~ 2856098 (-)
G1766061 NA non-coding upstream 232656 3247435 ~ 3248152 (-)
G1766114 NA non-coding upstream 303406 3318185 ~ 3318399 (-)
G1766446 itgbl1 non-coding upstream 316794 3331573 ~ 3353785 (-)
G1766756 NA non-coding upstream 760888 3775667 ~ 3776056 (-)
G1766762 NA non-coding upstream 765437 3780216 ~ 3780636 (-)
klf5b LOC106586047 other downstream 1584871 1420358 ~ 1428026 (-)
G1763459 NA other downstream 1792874 1218802 ~ 1219717 (-)
G1762219 LOC106593246 other downstream 2907234 86357 ~ 105357 (-)
G1766126 NA other upstream 310942 3325721 ~ 3326343 (-)
G1769281 NA other upstream 2785982 5800761 ~ 5825307 (-)
G1769618 NA other upstream 2945371 5960150 ~ 5960815 (-)
G1771092 NA other upstream 4237005 7251784 ~ 7256717 (-)

Expression


Co-expression Network