Gene
RNA
| Item | Value |
|---|---|
| gene id | G1771370 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 7398117 ~ 7398525 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2028647 | True | 409 | lncRNA | 0.43 | 1 | 7398117 | 7398525 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502040 | NA | coding | downstream | 51276 | 7339227 ~ 7346841 (-) |
| LOC110501290 | LOC106581993 | coding | downstream | 72098 | 7323597 ~ 7326019 (-) |
| slc39a10 | slc39a10 | coding | downstream | 229735 | 7103577 ~ 7168382 (-) |
| LOC118943629 | NA | coding | downstream | 542684 | 6854086 ~ 6855433 (-) |
| LOC110501288 | LOC106581686 | coding | downstream | 1171551 | 6082380 ~ 6226566 (-) |
| LOC110501291 | tri13 | coding | upstream | 22779 | 7421304 ~ 7423921 (-) |
| LOC110501292 | NA | coding | upstream | 31202 | 7429727 ~ 7436795 (-) |
| phf11 | LOC106582016 | coding | upstream | 92346 | 7490871 ~ 7499919 (-) |
| LOC110501297 | LOC106582017 | coding | upstream | 118888 | 7517413 ~ 7525380 (-) |
| LOC110501299 | LOC106582019 | coding | upstream | 127733 | 7526258 ~ 7597443 (-) |
| G1771197 | NA | non-coding | downstream | 22931 | 7374865 ~ 7375186 (-) |
| G1771196 | NA | non-coding | downstream | 23821 | 7373991 ~ 7374296 (-) |
| G1771123 | NA | non-coding | downstream | 91625 | 7306098 ~ 7306492 (-) |
| G1771107 | NA | non-coding | downstream | 102327 | 7289435 ~ 7295790 (-) |
| G1771096 | NA | non-coding | downstream | 129008 | 7266420 ~ 7269109 (-) |
| G1771372 | NA | non-coding | upstream | 1437 | 7399962 ~ 7400192 (-) |
| G1771374 | NA | non-coding | upstream | 3481 | 7402006 ~ 7402350 (-) |
| G1771421 | NA | non-coding | upstream | 60575 | 7459100 ~ 7459316 (-) |
| G1771422 | NA | non-coding | upstream | 60826 | 7459351 ~ 7459566 (-) |
| G1771425 | NA | non-coding | upstream | 62727 | 7461252 ~ 7461544 (-) |
| G1771092 | NA | other | downstream | 141400 | 7251784 ~ 7256717 (-) |
| G1769618 | NA | other | downstream | 1437302 | 5960150 ~ 5960815 (-) |
| G1769281 | NA | other | downstream | 1572810 | 5800761 ~ 5825307 (-) |
| fgf14 | fgf14 | other | downstream | 3624108 | 3447431 ~ 3774567 (-) |
| G1766126 | NA | other | downstream | 4071774 | 3325721 ~ 3326343 (-) |
| G1771426 | LOC106582012 | other | upstream | 63688 | 7462213 ~ 7464692 (-) |
| LOC110501323 | LOC106581977 | other | upstream | 1226497 | 8624815 ~ 8684792 (-) |
| LOC110501325 | LOC106581976 | other | upstream | 1338654 | 8737175 ~ 8758540 (-) |
| LOC110502107 | grk1 | other | upstream | 1364767 | 8763292 ~ 8768047 (-) |
| gpr161a | gpr161 | other | upstream | 1660451 | 9044945 ~ 9063520 (-) |
