G1771426 (LOC106582012)



Basic Information


Item Value
gene id G1771426
gene name LOC106582012
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 7462213 ~ 7464692 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2028728
CCGCTGAACAATTGaacaaatggccacccagactatttgcattttgatcagaacacacacatacctccTGTACTGTCTCCATGGGGGGCGGTGGGTCCTTGTTGCGGCAGAGGTTGACAATGACCCAGGTGACGTTACGGAGGAAGGTGATGGGGATGGAGGGGTTAATGAAGGACAGCAGGGGCTTGACCACGCCCAGGGAGATGACGTAATCCCTGCACTGTGGCCCGTCGCCTGGAGGAGGAGCATCACAGGTCAAAGGCCATCATTGGGGCACCAGTTTTTCCTGGTCCGGTCACATGGTTAGTCATTACagaagaaacacacaaacacaactttAATGATGTGTTAACTGTATCAGCCATACTCACCTATGATGTTGCCTAGCGCCCACACGGCCTGTTCACACACATTGTGATGGGGAGAGTGGAGCAGACGCAGGAACAGGGGAACAGCATTGGACTTGACCACAGCCTGGGTCTGTTGTGACGTGCCAGACGCTATGTTGGTCAGGGCCCAGGCTGCCTCAAACTGAAGAGACGGaTTGTCGTCTCTCTCCAGACATTTGACTAAGATGGGCAGGATGCCAGACTTTATCAAGTCATCAATGGGAGGGTTTCTGTCACTGGAGAGGAGTTTTCTGGCAGCCTGTACGGCACTAAGCTGGACCACAGCATTATCACTGGTGGCGTTCTGTAAGATGGCCTCTAGTGTGATGTTTTGCCCTTTGAAGTCGGAGTCGAAGTCGGAGTCCTCCAGACTGTCCTCCTGTGGGACATTCCTCTTCTTCAGGAGATGCTCGTCTCGTTTGTTCTGacggaagagaggggagggacaagAGAACAAAACACTGATGAATATTCAAATACGCGACAGAGTAGCAGTGC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2028728 True 887 TUCP 0.52 6 7462213 7464692

Neighbor


gene id symbol gene type direction distance location
LOC110501292 NA coding downstream 25418 7429727 ~ 7436795 (-)
LOC110501291 tri13 coding downstream 38292 7421304 ~ 7423921 (-)
LOC110502040 NA coding downstream 115372 7339227 ~ 7346841 (-)
LOC110501290 LOC106581993 coding downstream 136194 7323597 ~ 7326019 (-)
slc39a10 slc39a10 coding downstream 293831 7103577 ~ 7168382 (-)
phf11 LOC106582016 coding upstream 26179 7490871 ~ 7499919 (-)
LOC110501297 LOC106582017 coding upstream 52721 7517413 ~ 7525380 (-)
LOC110501299 LOC106582019 coding upstream 61566 7526258 ~ 7597443 (-)
LOC110501300 LOC106582021 coding upstream 143492 7608184 ~ 7668624 (-)
LOC110501302 LOC106582022 coding upstream 254778 7719470 ~ 7736799 (-)
G1771425 NA non-coding downstream 669 7461252 ~ 7461544 (-)
G1771422 NA non-coding downstream 2647 7459351 ~ 7459566 (-)
G1771421 NA non-coding downstream 2897 7459100 ~ 7459316 (-)
G1771374 NA non-coding downstream 59863 7402006 ~ 7402350 (-)
G1771372 NA non-coding downstream 62021 7399962 ~ 7400192 (-)
G1771396 NA non-coding upstream 6395 7471087 ~ 7471579 (-)
G1771387 NA non-coding upstream 133348 7598040 ~ 7600956 (-)
G1771503 NA non-coding upstream 207394 7672086 ~ 7672326 (-)
G1771506 NA non-coding upstream 208240 7672932 ~ 7673262 (-)
G1771524 NA non-coding upstream 221803 7686495 ~ 7686723 (-)
G1771092 NA other downstream 205496 7251784 ~ 7256717 (-)
G1769618 NA other downstream 1501398 5960150 ~ 5960815 (-)
G1769281 NA other downstream 1636906 5800761 ~ 5825307 (-)
fgf14 fgf14 other downstream 3688204 3447431 ~ 3774567 (-)
G1766126 NA other downstream 4135870 3325721 ~ 3326343 (-)
LOC110501323 LOC106581977 other upstream 1160330 8624815 ~ 8684792 (-)
LOC110501325 LOC106581976 other upstream 1272487 8737175 ~ 8758540 (-)
LOC110502107 grk1 other upstream 1298600 8763292 ~ 8768047 (-)
gpr161a gpr161 other upstream 1594284 9044945 ~ 9063520 (-)
G1774133 NA other upstream 1637060 9101752 ~ 9123249 (-)

Expression



Co-expression Network