G1771809


Basic Information

Item Value
gene id G1771809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 7740125 ~ 7742305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2029163
TATTTTTGTGCCAGTGCAGCCATTGCCTTTAACTGGGCTCTAAAGACAAAAACCGACTATCGATGACTATGTCATGCCCGATAAACAACCATATATAGCATATAGGCTATATCAAATCTTTTTTTTATTGTCACTTGTGCCGAAAACAACACTTTACCGTAAAACGCTTACTTATGAGCcgtttcccaacaatgcagagttaaaaagtaaaacATCCTGATACTCTTCACACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAcccgctgctactctgttcattatctatcctgatacTCTTCACACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAcccgctgctactctgttcattatctatcctgatacTCTTCACACACAcccgctgctactctgttcattatctatcctgatacTCTTCAAACACAtcagctgctactctgttcattatctatcctgatacTCTTCAAACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAtccgctgctactctgttcattatctatcctgatacTCTTCACACATGCTGCTGATACtactctgttcattatctatcctgatacTCTTCACACACAtcagctgctactctgttcattatctatcctgatacTCTTCAAACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAtcagctgctactctgttcattatctatcctgataccCTTCAAACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAtccgctgctactctgttcattatctatcctgatacTCTTCACACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAtcagctgctactctgttcattatctatcctgatacTCTTCACACACAcccgctgctactctgttcattatctatcctgatacTCTTCACACATGCTGCTGATACtactctgttcattatctatcctgatacTCTTCACACACAtccgctgctactctgttcattatctatcctgatacTCTTCACACATGCTGCTGatactactctgtttattatttatCCTGATTGCCTTGTCACTTTTTCACCTAAAGGTAacagtgactaggcaatcagaaTAGATAATAACCAGAGTAGCAGCATGTGTGAAGAGTATCAGAATAGATAACAACCAGAGTAGCAGCATGTGTGAAGAGTATCAGAATAGATAACAACCAGAGTAGCAGCATGTGTGAAGAGTATCAGAATAGATAACAACCAGAGTAGCAGCATGTGTGAAGAGTATCAGAATAGATAACAACCAGAGTAGCAGCATGTGTGAAGAGTATCAGAATAGatcataaacagagtagcagcatgtGTGAAGAGTATCAGAATAGATAAGGGTCAATGTTATAATAGGGCTAGaattgggtttagggttaggagctagggttaaggtaagggtacgggttagggttactgttagggaaaataggattttgaatgggactgaattgtgtgtccatagaaggttagctgtacaagattgtttttgtgcatgtgtgcatgtgtgcgtggtGTGGCTATAAATAGCTATTTCTGTATAGGCATAGACCGACTATAGTCGATCAATCGAATTTGTGTGCAGGCTGGTTCAAAATGCTGAGCAGGGTTATCATCACAATGTTACACTATGCCTTCTTGCCCTTcctccatcccatcccatccacccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttgggagAAACGGGTTTGAGTGGCGCCAAATGAACTGTTTTAAACATACAAGTAGCCTGACCTGAAGCCCAATTTTGTTTTGATTGATTACTATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2029163 True 2087 lncRNA 0.41 2 7740125 7742305

Neighbor

gene id symbol gene type direction distance location
LOC110501302 LOC106582022 coding downstream 3326 7719470 ~ 7736799 (-)
LOC110501300 LOC106582021 coding downstream 71501 7608184 ~ 7668624 (-)
LOC110501299 LOC106582019 coding downstream 142682 7526258 ~ 7597443 (-)
LOC110501297 LOC106582017 coding downstream 214745 7517413 ~ 7525380 (-)
phf11 LOC106582016 coding downstream 240206 7490871 ~ 7499919 (-)
arhgef7a LOC106582025 coding upstream 49017 7791322 ~ 7905095 (-)
mrpl30 mrpl30 coding upstream 249980 7992285 ~ 7996860 (-)
si:dkey-4e7.3 LOC106582031 coding upstream 341512 8083817 ~ 8092866 (-)
inpp4aa LOC106586779 coding upstream 358440 8100745 ~ 8159515 (-)
mfsd9 mfsd9 coding upstream 419771 8162076 ~ 8173878 (-)
G1771529 NA non-coding downstream 49450 7690438 ~ 7690675 (-)
G1771528 NA non-coding downstream 49915 7689901 ~ 7690210 (-)
G1771524 NA non-coding downstream 53402 7686495 ~ 7686723 (-)
G1771506 NA non-coding downstream 66863 7672932 ~ 7673262 (-)
G1771503 NA non-coding downstream 67799 7672086 ~ 7672326 (-)
G1771818 NA non-coding upstream 12770 7755075 ~ 7755384 (-)
G1771820 NA non-coding upstream 17582 7759887 ~ 7760288 (-)
G1771827 NA non-coding upstream 33475 7775780 ~ 7779724 (-)
G1771829 NA non-coding upstream 37812 7780117 ~ 7780586 (-)
G1771795 NA non-coding upstream 47193 7789498 ~ 7867922 (-)
G1771426 LOC106582012 other downstream 275433 7462213 ~ 7464692 (-)
G1771092 NA other downstream 483408 7251784 ~ 7256717 (-)
G1769618 NA other downstream 1779310 5960150 ~ 5960815 (-)
G1769281 NA other downstream 1914818 5800761 ~ 5825307 (-)
fgf14 fgf14 other downstream 3966116 3447431 ~ 3774567 (-)
LOC110501323 LOC106581977 other upstream 882717 8624815 ~ 8684792 (-)
LOC110501325 LOC106581976 other upstream 994874 8737175 ~ 8758540 (-)
LOC110502107 grk1 other upstream 1020987 8763292 ~ 8768047 (-)
gpr161a gpr161 other upstream 1316671 9044945 ~ 9063520 (-)
G1774133 NA other upstream 1359447 9101752 ~ 9123249 (-)

Expression


Co-expression Network