G1773710


Basic Information

Item Value
gene id G1773710
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 8408496 ~ 8458976 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2031275
aacgaccctaagcacacagccaagacaacgcaggagtggcttcgggacaggtttctgaatgtccttgagtgaaccagccagagccccgacttgaacccgatcgaacatctctggagagacctgaaaatagctgttcagcaacgctcctcatccaacctgacagagattgagaggatctgcagagaaaaatgggagaaactctccaaattcaggtgtgccaagcctgtagtgtcatacccaagacgactcaatgctgtaattggtgcttcaacaaactactgagTAACTGATCTGAATACTTGATTtcagttttcagttttttatatttaatacatttacaaaaatttctacaaacctgtttttactttgtcattatgggggtattgtgtgtagattgatgagggggaaaaataattgaatatattttagaataagactaatgtaacaaaatgtggaaaactcaaggggtctgaatactttctgaatgcactgtatataacttTGAGAGTAAAACGCCTGAAGACCTGATCTTCATTGGAAAACAGCACTAGGGCCGGGGAATGAGTGAGTGAGGAAGTACAGCAAGTGTCGTGTAGAGCTGGAGACAATCAAATAGAAGTAGTGTAGAGCTGGAGCCAATAGAACATCAGAACAGTAAGTGTCGCGTAGAGCTGGAACCAATAGACTAGCAAAACAGTAATGCTGCTTTTGGACTGTAACACCAGCGTTACACTAGTTAGTGTATACAGCCTAATGTTATACTAGGGAAATGATGTTTCCATAGTTAGGGCTGACAATGAAGATTTGTGAAGAACTGAATAAACAACCTCTGCATAATCAAaacagttgctttgtgagaaggtgttaaagTTCAGTTAGCCATTTATGTAAATGCCAGCTGAAAAGTACCTGTGGCCTGTTATTGGCCCCAAATGAGAGCAGGACCGCCggagccatggcccagtgagacacgGGTGCCGGCCCGAGTAGAGggaaacagaaaagtctgagccTTGTGTGTAAAACACTGGACTACACCATAAGTGTAGTGTAGAGCTGGAGCCAATAGAAGAGCAATACAGTACGTGTTGTACATTGACAGACATTCAAACTCTACACTCTTTTCAATttgctctctcgctttctcctaCTTCTCCTCGATGATAGAGTGatgaagaggaggtagaggtggaagAAAATGActacagagaagaggaggatgaaggcagagaagaggagaaaaggcAAGAGGGTGTTTACAAATGGCCACTTAGTGAAGTCATTATTTCCTTTAGAAATCATCGGAACCTCTGGAGAGGGTTTTAAATGAGTTAACAAAAATGTGTGAATTCCAAACAAACAGAAAACCTAAAACCAAAGAAAGGAAACAGAACCAAGACCAGCAATGTGACTAGGCTAAAACAGACTAAGTTATCTCCCCAAGTTCAGCATGTTGAGGATTGCTGGGATATGGGCATTTGGTggagtgcgtatgtgtgtgtgtatatatgcatgTCTGAGTGCCTGTGGGTGTATCTGTGTTCATGTATGTGTGTCACAGCAGCGGTTTGACCAGGTAGAGCTTGTCTCCGTGTTGGCTGGTGAAGATGGGGGCTTTCTTGTAGTGTTCCACCAGTTCATCTATGGAGCTGAACCTGCGCTGGCCGATACAGTAGACCTCCTCTGAACACTGCACCTTGAAGTGCTTGTTCTTCCCAGGTGCcttcagagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2031275 True 1733 lncRNA 0.43 2 8408496 8458976

Neighbor

gene id symbol gene type direction distance location
LOC110501321 fhl2 coding downstream 98027 8294881 ~ 8310469 (-)
mfsd9 mfsd9 coding downstream 234618 8162076 ~ 8173878 (-)
inpp4aa LOC106586779 coding downstream 248981 8100745 ~ 8159515 (-)
si:dkey-4e7.3 LOC106582031 coding downstream 315630 8083817 ~ 8092866 (-)
mrpl30 mrpl30 coding downstream 411636 7992285 ~ 7996860 (-)
LOC110501323 LOC106581977 coding upstream 165839 8624815 ~ 8684792 (-)
LOC110501325 LOC106581976 coding upstream 278199 8737175 ~ 8758540 (-)
LOC110502107 grk1 coding upstream 305048 8763292 ~ 8768047 (-)
LOC110501327 LOC106581971 coding upstream 311192 8770168 ~ 8783060 (-)
LOC110501332 LOC106581974 coding upstream 339769 8798745 ~ 8807833 (-)
G1773716 NA non-coding downstream 30352 8376377 ~ 8378144 (-)
G1773693 NA non-coding downstream 79549 8323947 ~ 8328947 (-)
G1773604 NA non-coding downstream 242534 8164485 ~ 8165962 (-)
G1772031 NA non-coding downstream 248222 8159991 ~ 8160274 (-)
G1772025 NA non-coding downstream 254760 8152472 ~ 8153736 (-)
G1773773 NA non-coding upstream 21037 8480013 ~ 8482406 (-)
G1773851 NA non-coding upstream 149741 8608717 ~ 8608923 (-)
G1773855 LOC106581978 non-coding upstream 155695 8614671 ~ 8615016 (-)
G1773857 NA non-coding upstream 157626 8616602 ~ 8616808 (-)
G1773825 NA non-coding upstream 160471 8619447 ~ 8623484 (-)
G1771426 LOC106582012 other downstream 943804 7462213 ~ 7464692 (-)
G1771092 NA other downstream 1151779 7251784 ~ 7256717 (-)
G1769618 NA other downstream 2447681 5960150 ~ 5960815 (-)
G1769281 NA other downstream 2583189 5800761 ~ 5825307 (-)
fgf14 fgf14 other downstream 4634487 3447431 ~ 3774567 (-)
gpr161a gpr161 other upstream 600000 9044945 ~ 9063520 (-)
G1774133 NA other upstream 642776 9101752 ~ 9123249 (-)

Expression


Co-expression Network