Gene
RNA
| Item | Value |
|---|---|
| gene id | G1773855 |
| gene name | LOC106581978 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 8614671 ~ 8615016 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| parapinopsin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2031428 | True | 346 | lncRNA | 0.60 | 1 | 8614671 | 8615016 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502043 | LOC106581982 | coding | downstream | 121778 | 8443607 ~ 8492893 (-) |
| LOC110501321 | fhl2 | coding | downstream | 304202 | 8294881 ~ 8310469 (-) |
| mfsd9 | mfsd9 | coding | downstream | 440793 | 8162076 ~ 8173878 (-) |
| inpp4aa | LOC106586779 | coding | downstream | 455156 | 8100745 ~ 8159515 (-) |
| si:dkey-4e7.3 | LOC106582031 | coding | downstream | 521805 | 8083817 ~ 8092866 (-) |
| LOC110501323 | LOC106581977 | coding | upstream | 9799 | 8624815 ~ 8684792 (-) |
| LOC110501325 | LOC106581976 | coding | upstream | 122159 | 8737175 ~ 8758540 (-) |
| LOC110502107 | grk1 | coding | upstream | 149008 | 8763292 ~ 8768047 (-) |
| LOC110501327 | LOC106581971 | coding | upstream | 155152 | 8770168 ~ 8783060 (-) |
| LOC110501332 | LOC106581974 | coding | upstream | 183729 | 8798745 ~ 8807833 (-) |
| G1773851 | NA | non-coding | downstream | 5748 | 8608717 ~ 8608923 (-) |
| G1773773 | NA | non-coding | downstream | 132265 | 8480013 ~ 8482406 (-) |
| G1773710 | NA | non-coding | downstream | 155695 | 8408496 ~ 8458976 (-) |
| G1773708 | NA | non-coding | downstream | 201443 | 8361838 ~ 8413228 (-) |
| G1773716 | NA | non-coding | downstream | 236527 | 8376377 ~ 8378144 (-) |
| G1773857 | NA | non-coding | upstream | 1586 | 8616602 ~ 8616808 (-) |
| G1773825 | NA | non-coding | upstream | 4431 | 8619447 ~ 8623484 (-) |
| G1773886 | NA | non-coding | upstream | 64359 | 8679375 ~ 8679685 (-) |
| G1773906 | NA | non-coding | upstream | 88267 | 8703283 ~ 8703505 (-) |
| G1773966 | NA | non-coding | upstream | 190323 | 8805339 ~ 8805639 (-) |
| G1771426 | LOC106582012 | other | downstream | 1149979 | 7462213 ~ 7464692 (-) |
| G1771092 | NA | other | downstream | 1357954 | 7251784 ~ 7256717 (-) |
| G1769618 | NA | other | downstream | 2653856 | 5960150 ~ 5960815 (-) |
| G1769281 | NA | other | downstream | 2789364 | 5800761 ~ 5825307 (-) |
| fgf14 | fgf14 | other | downstream | 4840662 | 3447431 ~ 3774567 (-) |
| gpr161a | gpr161 | other | upstream | 443960 | 9044945 ~ 9063520 (-) |
| G1774133 | NA | other | upstream | 486736 | 9101752 ~ 9123249 (-) |
