G1773977


Basic Information

Item Value
gene id G1773977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 8926933 ~ 8929426 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2031566
CCTTTTTTTTTATTCCCttcaaaacatacatttttcctTGAACCCCAAATAGAATTCCTTCTGTGGTGCATCACGCCTAAGCAGAGCACAATATTCTCTGGGGGAAAAGAAAATATAACATTTACCATGTCTGTCATTACCTTTGGCAAAAACACCTAAACCGAAACAGGCAACGCTTTATACAAAACTACACACACAAAAAGATACAACCCCTCCATTATTAAAAAAGCATACCCAAAGAGGCAATCACATATGTAATTATTTTGGGCGCTACTCTTGCTCTCGAGAACCCAAGGCATTCTCAGCTATAAGCACTGCTTATTGGTGGGAACATGTGAACTATAACTCGACGCTCTGTTTTAATGTTTAGAAACGTCAATCATCATCGTTGCGATACGGTTTTGGAAACATACCGCAAGCGATTTGTGTTAACGTTCAGAACAAGCGTCGGtgctcttaacaaaactcccccggCCAGAAGTTACCGTCATGAATAGATGCTAAAGGTAGTTAGCGTCTATGCATGGGCTAGTGGTACACTAGTGTTTATTAAAGCTTCCTCTATCATGTACACAAACGTCGGGCACCGCACAAACCTGAAGTCccttgtggctcagttggtagagcccggcgcttgcaacgccaggttCGTGGGTTCAATTCCGACGAGTAcgaagaaaatataaaaaattccactcactactgtaagtgagataagagtgtctgctaaattactcaaatgtaaaagtCAGTTCCTAATGGTAATGATGTCGGGGATAAAAATGTAGCTAGTCATCTCGTTAAAACTCTGACACGCATCAACAGGGAAGTCTAGAATAAAAATACAAGATGAACAGGGTGTCCTATTTTAAATTCTATAGGTTATCTAACTGGTCCTCTTGTAACCCAGGCTTTGGCAGGAGTGTAGCCTAAAGTATGAAGTGACAACAGGGAGCAAGAAATTGTCAGTTAATAATATATTGGAGTTGTGCTTTAAAATCAATGATACTGCAGTGTGAACCAGCGTGTACATATTCTTTGCTAATAGCTGATAGAATCCTCCAACTAAAGACGAGTATCTGCAGGATATTACATGTGAGGTCAGGAGGTCAAACGGAGGCCGGCACTATTATCGAGACTAATTTGAAAACAATGGACAGGTAAAGGCGATAAGGGATTCACCCATCCACTTTTCCAAGCAAAGGAAGCAAGGTAAAACTATTGAGATGCAACCTACAATAGATGACAGAGACCTTTCGGGAATATGCCATTTCTGCCTATTAGTTATTAAAGCTagtccaaacatgctcaacggagTGTGTTATTAGGGGTTTGGTGACACAGAACAGTCTGTCTCCAGATTCTGTATCAATCACAAATAAATAATCTCAaaatagaatatagaatgtatAGAACTGATAGGGTTCCCTCAAGTTACACATGAAACGTCGTGGCACTAACCTGGCAATTTGATGATATggtaaaCAAAGCAATTACAAAAGTCAAGGGGGACATCAAATGAAATGACTGAAACTTCAGAAAAATACCCCTTAAATTATATTTCTGCTGGTTAACCATTTGTAATCTCCTACAGATGTACATCCTATGTATTACATTCTATGGGAACTGGGGAGTGTCTAGAGGCAATGGAGTGTCTCGTCTTGATGACCTAGCTGCAGAAGGCTTTGGGCgcgttcctctgcccaggcgttGAGGACACATGCCAGATCTGgacgcctggataggtattttatgtATGAGTAAACcacatatgttatagcaatctggtgcCGGAAGGCACTGTCGATGCCGTGGaatgcaaccattggttgatgcatgcaacgtctgagcaggggaacgcgACTGTTGAGTGATGATTGGTGAAATTATGCGAAATCTGGAGAGGCGGTAGCGCATGTCTGATATGTGTAGCTCCCTTGTGCTGTACTGAGGGATCGAACGTtggggatagaaagagaggtggCTGATGGAGTTCACACGTCCTGGACTTTCATGGCGTCCTGGGGCCAGTCGTAGGTGTCCTGGACGAAGGAGTCATAGTCGGGGCTGTAGACATGGGAGAGCACAAACGCCTCCTTGTCCTTGGGCTCCGGGTACAGGGAGGCAATTTTGTGTCTGTACGCATAGTCAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2031566 True 2153 lncRNA 0.43 3 8926933 8929426

Neighbor

gene id symbol gene type direction distance location
LOC110501335 pou2f1 coding downstream 75185 8827735 ~ 8851748 (-)
LOC110501332 LOC106581974 coding downstream 119100 8798745 ~ 8807833 (-)
LOC110501327 LOC106581971 coding downstream 143873 8770168 ~ 8783060 (-)
LOC110502107 grk1 coding downstream 159108 8763292 ~ 8768047 (-)
LOC110501325 LOC106581976 coding downstream 184594 8737175 ~ 8758540 (-)
LOC110501339 cep97 coding upstream 11717 8936033 ~ 8953086 (-)
gpr161a gpr161 coding upstream 115519 9044945 ~ 9063520 (-)
si:ch211-218d20.15 LOC106581952 coding upstream 227493 9156919 ~ 9165305 (-)
med14 LOC106581951 coding upstream 235978 9165404 ~ 9205109 (-)
rpl8 LOC106586796 coding upstream 359925 9289279 ~ 9291975 (-)
G1773938 NA non-coding downstream 99253 8826301 ~ 8827680 (-)
G1773936 NA non-coding downstream 100778 8820854 ~ 8826155 (-)
G1773966 NA non-coding downstream 121294 8805339 ~ 8805639 (-)
G1773906 NA non-coding downstream 223428 8703283 ~ 8703505 (-)
G1773886 NA non-coding downstream 247248 8679375 ~ 8679685 (-)
G1774034 NA non-coding upstream 228 8929654 ~ 8929886 (-)
G1774038 NA non-coding upstream 2941 8932367 ~ 8937720 (-)
G1774039 NA non-coding upstream 4652 8934078 ~ 8939330 (-)
G1774040 NA non-coding upstream 5501 8934927 ~ 8940202 (-)
LOC110501323 LOC106581977 other downstream 285795 8624815 ~ 8684792 (-)
G1771426 LOC106582012 other downstream 1462241 7462213 ~ 7464692 (-)
G1771092 NA other downstream 1670216 7251784 ~ 7256717 (-)
G1774133 NA other upstream 172326 9101752 ~ 9123249 (-)
fundc1 fundc1 other upstream 805816 9635535 ~ 9737896 (-)
G1777196 LOC100136012 other upstream 2911647 11841073 ~ 11843059 (-)

Expression


Co-expression Network