G1774133


Basic Information

Item Value
gene id G1774133
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 9101752 ~ 9123249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2031767
caataattactgaaatgaaagctagacagtcagggagcatcggAAATTCCAAAAACGATGGATAAAGGACTACACTTAGCAAATTTTAGCTTTTTACTGTCAAAATGCCTGTCAAAGACAAAGAGAAATTCTCTCTTGCCACTAtattgtcacggatccctccggaactttcattatgcacacctgtcccctattcccactgattagtacttgtataagtgtgccctttggtttctatcgggctgtcgattattgttcccGTGTCCACTGGTGGTGcgagtacctatgcgttggtgcagctgttatgCTGCGTGCTATATACATTGTGTATTATGGGAATCGTCCTGTGGCGTTCAACAGGGTttaccctcgctcttttgtttgggttcagcccagtgtttttgtatacgtgtttgttttgggtgtattaaaaacccctattgtgtattcctgcacctgtctccaTAATCCTTTATACCAACATGACATATATTGGTTGTGTTACCAGGATCCTAAATTGTAAAACAAGAAAGTTGTACACTCAATATATATACTCCAAACAATTGATTAAGTAGACCTAATAACCAACGTTTTGGTAACTGACTGTGCGACTTGATTTTTATACAGTTCAATCCTTGTTGGTTAGCGCCTCTACAAAACAATGTGTGCGTCAGCTCATGCTTTTTACTAAACAGGATCTTGAATTGGCATCACACATGCTAGACAGGCCAACAGTTTTGAAGTCACACTCCAACAGCACAGTGGCTGACTGTGGAATAAATAggaggttgctgaggggaggacggctcataataatggctgtaatggaacaaatgaaatggtatcaaacacatggaaactacgtgtttgatgtatttgataccattccactcattccgctccagccattaccagcaGTTAAAGTgcaaccaacctcctgtggtggaaTGAGACTGTCTTGCTGGTGGCAGGCATCAGGCCTTATTGACAACAGATACATGAAGTTACTCTGACATTATCCTGAGATATCAAATCaaacaaacataaaaatgttatacACAGGGCCTAGAGTGGGTAGTATAGTTACTCTGGACTCTAGGGCCTGATGGCTTGGGCTGGGATTCAATCTGTAGCGCATTGTAGCGCGCTTGACATTTTAAGGTACTTTCTGATTGAGCCAATATCTGCAGCGTTTACTGTGAATGTGATCTCAGCAAAcacaggaacattgcctttaaaaggcaCATTATCGTCAACAGCGCTCTACAACGAGCCTTTGATTGAATCCCGGCCTAGGCCACAGGAAGGACATtcactccttcttcttcttcttcatagTCTTCTTCGTTCCACAACATTTGCGGAAGCAGACTTTGCAGCATTTAACGGTGACCATGACAACAATGAGAACTATAGTGAGTAGCAGAGTGAACACGTCCAGACTGTGGTACTGGATCCAGTTGAGGTCGTGAGCGGCGGGTCTCAGGTGTTCCGCTCCGCCGTGACGCATCACAAACTCTGACCAGAACACGGCCAGGTCCAGGGGCTCGATGGGACGGTCCTTATGTACCGCTGACAGCTTCAGCATCTTCTCCT
>TU2031769
AGAACAAAAAGCATGAATTActgaaatgaaagctagacagtcagggagcatcggAAATTCCAAAAACGATGGATAAAGGACTACATTTAGCCAATTTTAGCTTTTTACTGTCAAAAGGCCTTTTAAAGACAAAGAGAAATTCTCTCTTGCCACTATATTGTCatggatccctccggaactttcattatgCACAcatgtcccctattcccactgattagtacttgtataagtgtgccctttggtttctaTCGGGCTGTCGATTGTTGTTCCCGTGTCCACTGGTGGTGcgagtacctatgcgttggtgcagctgttatgctgcgtgctatatatatTGTGTATTATGGGAATCGTCCTGTGGCGTTCAACAGGGTttaccctcgctcttttgtttgggttcagcccagtgtttttgtatacgtgtttgttttgggtgtattaaaaacccctattgtgtattcctgcacctgtctccaTAATCCTTTATACCAACATGACATATATTGGTTGTGTTACCAGGATCCTAAATTGTAAAACAAGAAAGTTGTACACTCAATATATATACTCCAAACAATTGATTAAGTAGACCTAATAACCAACGTTTTGGTAACTGACTGTGCGACTTGATTTTTATACAGTTCAATCCTTGTTGGTTAGCGCCTCTACAAAACAATGTGTGCGTCAGCTCATGCTTTTTACTAAACAGGATCTTGAATTGGCATCACACATGCTAGACAGGCCAACAGTTTTGAAGTCACACTCCAACAGCACAGTGGCTGACTGTGGAATAAATAggaggttgctgaggggaggacggctcataataatggctgtaatggaacaaatgaaatggtatcaaacacatggaaactacgtgtttgatgtatttgataccattccactcattccgctccagccattaccagcaGTTAAAGTgcaaccaacctcctgtggtggaaTGAGACTGTCTTGCTGGTGGCAGGCATCAGGCCTTATTGACAACAGATACATGAAGTTACTCTGACATTATCCTGAGATATCAAATCaaacaaacataaaaatgttatacACAGGGCCTAGAGTGGGTAGTATAGTTACTCTGGACTCTAGGGCCTGATGGCTTGGGCTGGGATTCAATCTGTAGCGCATTGTAGCGCGCTTGACATTTTAAGGTACTTTCTGATTGAGCCAATATCTGCAGCGTTTACTGTGAATGTGATCTCAGCAAACacggaacattgcctttaaaaggcaCATTATCGTCAACAGCGCTCTACAACGAGCCTTTGATTGAATCCCGGCCTAGGCCACAGGAAGGACATTcactccttcttcttcttcatagTCTTCTTCGTTCCACAACATTTGCGGAAGCAGACTTTGCAGCATTTAACGGTGACCATGACAACAATGAGAACTATAGTGAGTAGCAGAGTGAACACGTCCAGACTGTGGTACTGGATCCAGTTGAGGTCGTGAGCGGCGGGTCTCAGGTGTTCCGCTCCGCCGTGACGCATCACAAACTCTGACCAGAACACGGCCAGGTCCAGGGGCTCGATGGGACGGTCCTTATGTACCGCTGACAGCTTCAGCATCTTCTCCT
>TU2031771
AGAACAAAAAGCATGAATTActgaaatgaaagctagacagtcagggagcatcggAAATTCCAAAAACGATGGATAAAGGACTACATTTAGCCAATTTTAGCTTTTTACTGTCAAAAGGCCTTTTAAAGACAAAGAGAAATTCTCTCTTGCCACTATATTGTCacggatccctccggaactttcattatgcacacctgtcccctattcccactgattagtacttgtataagtgtgccctttggtttctatcgggctgtcgattattgttcccGTGTCCACTGGTGGTGcgagtacctatgcgttggtgcagctgttatgCTGCGTGCTATATACATTGTGTATTATGGGAATCGTCCTGTGGCGTTCAACAGGGTttaccctcgctcttttgtttgggttcagcccagtgtttttgtatacgtgtttgttttgggtgtattaaaaacccctattgtgtattcctgcacctgtctccaTAATCCTTTATACCAACATGACATATATTGGTTGTGTTACCAGGATCCTAAATTGTAAAACAAGAAAGTTGTACACTCAATATATATACTCCAAACAATTGATTAAGTAGACCTAATAACCAACGTTTTGGTAACTGACTGTGCGACTTGATTTTTATACAGTTCAATCCTTGTTGGTTAGCGCCTCTACAAAACAATGTGTGCGTCAGCTCATGCTTTTTACTAAACAGGATCTTGAATTGGCATCACACATGCTAGACAGGCCAACAGTTTTGAAGTCACACTCCAACAGCACAGTGGCTGACTGTGGAATAAATAggaggttgctgaggggaggacggctcataataatggctgtaatggaacaaatgaaatggtatcaaacacatggaaactacgtgtttgatgtatttgataccattccactcattccgctccagccattaccagcaGTTAAAGTgcaaccaacctcctgtggtggaaTGAGACTGTCTTGCTGGTGGCAGGCATCAGGCCTTATTGACAACAGATACATGAAGTTACTCTGACATTATCCTGAGATATCAAATCaaacaaacataaaaatgttatacACAGGGCCTAGAGTGGGTAGTATAGTTACTCTGGACTCTAGGGCCTGATGGCTTGGGCTGGGATTCAATCTGTAGCGCATTGTAGCGCGCTTGACATTTTAAGGTACTTTCTGATTGAGCCAATATCTGCAGCGTTTACTGTGAATGTGATCTCAGCAAAcacaggaacattgcctttaaaaggcaCATTATCGTCAACAGCGCTCTACAACGAGCCTTTGATTGAATCCCGGCCTAGGCCACAGGAAGGACATtcactccttcttcttcttcttcatagTCTTCTTCGTTCCACAACATTTGCGGAAGCAGACTTTGCAGCATTTAACGGTGACCATGACAACAATGAGAACTATAGTGAGTAGCAGAGTGAACACGTCCAGACTGTGGTACTGGATCCAGTTGAGGTCGTGAGCGGCGGGTCTCAGGTGTTCCGCTCCGCCGTGACGCATCACAAACTCTGACCAGAACACGGCCAGGTCCAGGGGCTCGATGGGACGGTCCTTATGTACCGCTGACAGCTTCAGCATCTTCTCCT
>TU2031772
AGAACAAAAAGCATGAATTActgaaatgaaagctagacagtcagggagcatcggAAATTCCAAAAACGATGGATAAAGGACTACATTTAGCCAATTTTAGCTTTTTACTGTCAAAAGGCCTTTTAAAGACAAAGAGAAATTCTCTCTTGCCACTATATTGTCacggatccctccggaactttcattatgcacacctgtcccctattcccactgattagtacttgtataagtgtgccctttggtttctatcgggctgtcgattattgttcccGTGTCCACTGGTGGTGcgagtacctatgcgttggtgcagctgttatgCTGCGTGCTATATACATTGTGTATTATGGGAATCGTCCTGTGGCGTTCAACAGGGTttaccctcgctcttttgtttgggttcagcccagtgtttttgtatacgtgtttgttttgggtgtattaaaaacccctattgtgtattcctgcacctgtctccaTAATCCTTTATACCAACATGACATATATTGGTTGTGTTACCAGGATCCTAAATTGTAAAACAAGAAAGTTGTACACTCAATATATATACTCCAAACAATTGATTAAGTAGACCTAATAACCAACGTTTTGGTAACTGACTGTGCGACTTGATTTTTATACAGTTCAATCCTTGTTGGTTAGCGCCTCTACAAAACAATGTGTGCGTCAGCTCATGCTTTTTACTAAACAGGATCTTGAATTGGCATCACACATGCTAGACAGGCCAACAGTTTTGAAGTCACACTCCAACAGCACAGTGGCTGACTGTGGAATAAATAggaggttgctgaggggaggacggctcataataatggctgtaatggaacaaatgaaatggtatcaaacacatggaaactacgtgtttgatgtatttgataccattccactcattccgctccagccattaccagcaGTTAAAGTgcaaccaacctcctgtggtggaaTGAGACTGTCTTGCTGGTGGCAGGCATCAGGCCTTATTGACAACAGATACATGAAGTTACTCTGACATTATCCTGAGATATCAAATCaaacaaacataaaaatgttatacACAGGGCCTAGAGTGGGTAGTATAGTTACTCTGGACTCTAGGGCCTGATGGCTTGGGCTGGGATTCAATCTGTAGCGCATTGTAGCGCGCTTGACATTTTAAGGTACTTTCTGATTGAGCCAATATCTGCAGCGTTTACTGTGAATGTGATCTCAGCAAACacggaacattgcctttaaaaggcaCATTATCGTCAACAGCGCTCTACAACGAGCCTTTGATTGAATCCCGGCCTAGGCCACAGGAAGGACATTcactcattcttcttcttcttcatagTCTTCTTCGTTCCACAACACTTGCGGAAGCAGACTTTGCAGCATTTAACGGTGACCATGACAACAATGAGAACTATAGTGAGTAGCAGAGTGAACACGTCCAGACTGTGGTACTGGATCCAGTTGAGGTCGTGAGCGGCGGGTCTCAGGTGTTCCGCTCCGCCGTGACGCATCACAAACTCTGACCAGAACACGgaacattgcctttaaaaggcaCATTATCGTCAACAGCGCTCTACAACGAGCCTTTGATTGAATCCCGGCCTAGGCCACAGGAAGGACATtcactccttcttcttcttcttcatagTCTTCTTCGTTCCACAACATTTGCGGAAGCAGACTTTGCAGCATTTAACGGTGACCATGACAACAATGAGAACTATAGTGAGTAGCAGAGTGAACACGTCCAGACTGTGGTACTGGATCCAGTTGAGGTCGTGAGCGGCGGGTCTCAGGTGTTCCGCTCCGCCGTGACGCATCACAAACTCTGACCAGAACACGGCCAGGTCCAGGGGCTCGATGGGACGGTCCTTATGTACCGCTGACAGCTTCAGCATCTTCTCCT
>TU2031770
AGAACAAAAAGCATGAATTActgaaatgaaagctagacagtcagggagcatcggAAATTCCAAAAACGATGGATAAAGGACTACATTTAGCCAATTTTAGCTTTTTACTGTCAAAAGGCCTTTTAAAGACAAAGAGAAATTCTCTCTTGCCACTATATTGTCatggatccctccggaactttcattatgCACAcatgtcccctattcccactgattagtacttgtataagtgtgccctttggtttctaTCGGGCTGTCGATTGTTGTTCCCGTGTCCACTGGTGGTGcgagtacctatgcgttggtgcagctgttatgctgcgtgctatatatatTGTGTATTATGGGAATCGTCCTGTGGCGTTCAACAGGGTttaccctcgctcttttgtttgggttcagcccagtgtttttgtatacgtgtttgttttgggtgtattaaaaacccctattgtgtattcctgcacctgtctccaTAATCCTTTATACCAACATGACATATATTGGTTGTGTTACCAGGATCCTAAATTGTAAAACAAGAAAGTTGTACACTCAATATATATACTCCAAACAATTGATTAAGTAGACCTAATAACCAACGTTTTGGTAACTGACTGTGCGACTTGATTTTTATACAGTTCAATCCTTGTTGGTTAGCGCCTCTACAAAACAATGTGTGCGTCAGCTCATGCTTTTTACTAAACAGGATCTTGAATTGGCATCACACATGCTAGACAGGCCAACAGTTTTGAAGTCACACTCCAACAGCACAGTGGCTGACTGTGGAATAAATAggaggttgctgaggggaggacggctcataataatggctgtaatggaacaaatgaaatggtatcaaacacatggaaactacgtgtttgatgtatttgataccattccactcattccgctccagccattaccagcaGTTAAAGTgcaaccaacctcctgtggtggaaTGAGACTGTCTTGCTGGTGGCAGGCATCAGGCCTTATTGACAACAGATACATGAAGTTACTCTGACATTATCCTGAGATATCAAATCaaacaaacataaaaatgttatacACAGGGCCTAGAGTGGGTAGTATAGTTACTCTGGACTCTAGGGCCTGATGGCTTGGGCTGGGATTCAATCTGTAGCGCATTGTAGCGCGCTTGACATTTTAAGGTACTTTCTGATTGAGCCAATATCTGCAGCGTTTACTGTGAATGTGATCTCAGCAAACacggaacattgcctttaaaaggcaCATTATCGTCAACAGCGCTCTACAACGAGCCTTTGATTGAATCCCGGCCTAGGCCACAGGAAGGACATTcactcattcttcttcttcttcatagTCTTCTTCGTTCCACAACACTTGCGGAAGCAGACTTTGCAGCATTTAACGGTGACCATGACAACAATGAGAACTATAGTGAGTAGCAGAGTGAACACGTCCAGACTGTGGTACTGGATCCAGTTGAGGTCGTGAGCGGCGGGTCTCAGGTGTTCCGCTCCGCCGTGACGCATCACAAACTCTGACCAGAACACGGCCAGGTCCAGGGGCTCGATGGGACGGTCCTTATGTACCGCTGACAGCTTCAGCATCTTCTCCTTGTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2031767 False 1596 TUCP 0.44 2 9101752 9103439
TU2031769 False 1603 lncRNA 0.44 3 9101752 9123249
TU2031771 False 1607 TUCP 0.44 2 9101752 9123249
TU2031772 False 1915 lncRNA 0.45 3 9101752 9123249
TU2031770 True 1610 lncRNA 0.44 2 9112770 9123249

Neighbor

gene id symbol gene type direction distance location
gpr161a gpr161 coding downstream 38232 9044945 ~ 9063520 (-)
LOC110501339 cep97 coding downstream 148666 8936033 ~ 8953086 (-)
LOC110501335 pou2f1 coding downstream 250004 8827735 ~ 8851748 (-)
LOC110501332 LOC106581974 coding downstream 293919 8798745 ~ 8807833 (-)
LOC110501327 LOC106581971 coding downstream 318692 8770168 ~ 8783060 (-)
si:ch211-218d20.15 LOC106581952 coding upstream 33670 9156919 ~ 9165305 (-)
med14 LOC106581951 coding upstream 42155 9165404 ~ 9205109 (-)
rpl8 LOC106586796 coding upstream 166102 9289279 ~ 9291975 (-)
LOC110501351 cask coding upstream 205739 9328988 ~ 9535916 (-)
LOC110501355 LOC106581891 coding upstream 454658 9577907 ~ 9579194 (-)
G1774122 NA non-coding downstream 19100 9082144 ~ 9082652 (-)
G1774121 NA non-coding downstream 20204 9081059 ~ 9081548 (-)
G1774114 NA non-coding downstream 30659 9070777 ~ 9071093 (-)
G1774110 NA non-coding downstream 34805 9066652 ~ 9066947 (-)
G1774104 NA non-coding downstream 47217 9054218 ~ 9054535 (-)
G1774139 prmt2 non-coding upstream 10100 9133349 ~ 9135269 (-)
G1774150 NA non-coding upstream 32134 9155383 ~ 9155838 (-)
G1774352 NA non-coding upstream 430775 9554024 ~ 9554342 (-)
LOC110502107 grk1 other downstream 333705 8763292 ~ 8768047 (-)
LOC110501325 LOC106581976 other downstream 343212 8737175 ~ 8758540 (-)
LOC110501323 LOC106581977 other downstream 460614 8624815 ~ 8684792 (-)
G1771426 LOC106582012 other downstream 1637060 7462213 ~ 7464692 (-)
fundc1 fundc1 other upstream 611993 9635535 ~ 9737896 (-)
G1777196 LOC100136012 other upstream 2717824 11841073 ~ 11843059 (-)
G1777286 NA other upstream 2917859 12041108 ~ 12041622 (-)
G1777441 LOC106581914 other upstream 3144968 12268217 ~ 12270114 (-)

Expression


Co-expression Network