G1774135


Basic Information

Item Value
gene id G1774135
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 9107440 ~ 9119677 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2031777
cattaagccctaatcCCGGGATTTCATGTTACTGGGCGGGGGCGCAGCCATGGTTGGGAGCCACGCCCACCTACCACTTGGGAGCCACGCCCACCCATTGggtagccaatcagaattagtttttccccacaaaagggctttattacagacataaatacgcctacatttcatcagctgtccgggtggctggtcccagacgatcccacaggtgaagaagccggatatggaggtcctgggctggcgtggttacacgtggtctgtggttgtgaggccggttggatgtactgccaaattctctaaaacgacgttggaggcggcttatggtagagaaatgaacattcatttATCTGgaaacagctttggtggacatttcTGTGGCATTGTACTGTGTCACAAAACTTTACACtttggagtggccttttattgtccccagcacaattaCTTGTTCCTtatcttttatttcttattcttgattaggggcttgtaggtaagcacttcactgtaagtattgtattcggtgcatgtgattTGAAggtgcagtacgtccaactggcctcacaaccacaaatCACAGTAATTGCAAGTAGACCCTTCTCCGAAATATCCGCAGAACCACACACACGATGAACCAAACACACAATGAATTGTGGTCCTTCACTATGCAATGAAATTGTATGTACATACAGGCAGAAAACAAACAGCAACTGCTGTGTGAAACCTCACCTCATGGTGCTCATCAATATTTCACATTGAACAATATAAACAGACAAGGCATCAAATTATTTAACTCACATTAAAAACATGCATGTCTAAATTCCACACATCAGTATTAGAACAGTCTTTGGTCTGGTTAGCAAAACATTAACTGAAGGAGGGAGGGTGAAGTTGTGAAAGGATACCATGCCTTGATAACACACCCTGTATTCATAGAAGATAAAGGCATAATCAACCCTACAACAATCAcagctaaccccaacccttacccCACAGAACAATCCCTGCAGAGTAGTTTATCTTCCTGTGGTTTGTCGGGTAGGAACTAGAAGGGCCCCTCAGTTCCTCTGTTAGATTAT

Function

NR:

description
NEDD8-conjugating enzyme UBE2F-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2031777 True 1073 lncRNA 0.45 2 9107440 9119677

Neighbor

gene id symbol gene type direction distance location
gpr161a gpr161 coding downstream 43920 9044945 ~ 9063520 (-)
LOC110501339 cep97 coding downstream 154354 8936033 ~ 8953086 (-)
LOC110501335 pou2f1 coding downstream 255692 8827735 ~ 8851748 (-)
LOC110501332 LOC106581974 coding downstream 299607 8798745 ~ 8807833 (-)
LOC110501327 LOC106581971 coding downstream 324380 8770168 ~ 8783060 (-)
si:ch211-218d20.15 LOC106581952 coding upstream 37242 9156919 ~ 9165305 (-)
med14 LOC106581951 coding upstream 45727 9165404 ~ 9205109 (-)
rpl8 LOC106586796 coding upstream 169674 9289279 ~ 9291975 (-)
LOC110501351 cask coding upstream 209311 9328988 ~ 9535916 (-)
LOC110501355 LOC106581891 coding upstream 458230 9577907 ~ 9579194 (-)
G1774122 NA non-coding downstream 24788 9082144 ~ 9082652 (-)
G1774121 NA non-coding downstream 25892 9081059 ~ 9081548 (-)
G1774114 NA non-coding downstream 36347 9070777 ~ 9071093 (-)
G1774110 NA non-coding downstream 40493 9066652 ~ 9066947 (-)
G1774104 NA non-coding downstream 52905 9054218 ~ 9054535 (-)
G1774139 prmt2 non-coding upstream 13672 9133349 ~ 9135269 (-)
G1774150 NA non-coding upstream 35706 9155383 ~ 9155838 (-)
G1774352 NA non-coding upstream 434347 9554024 ~ 9554342 (-)
LOC110502107 grk1 other downstream 339393 8763292 ~ 8768047 (-)
LOC110501325 LOC106581976 other downstream 348900 8737175 ~ 8758540 (-)
LOC110501323 LOC106581977 other downstream 466302 8624815 ~ 8684792 (-)
G1771426 LOC106582012 other downstream 1642748 7462213 ~ 7464692 (-)
fundc1 fundc1 other upstream 615565 9635535 ~ 9737896 (-)
G1777196 LOC100136012 other upstream 2721396 11841073 ~ 11843059 (-)
G1777286 NA other upstream 2921431 12041108 ~ 12041622 (-)
G1777441 LOC106581914 other upstream 3148540 12268217 ~ 12270114 (-)

Expression


Co-expression Network