Gene
RNA
| Item | Value |
|---|---|
| gene id | G1774463 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 9774413 ~ 9774793 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Repetitive proline-rich cell wall protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2032159 | True | 261 | lncRNA | 0.53 | 3 | 9774413 | 9774793 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fundc1 | fundc1 | coding | downstream | 36517 | 9635535 ~ 9737896 (-) |
| efhc2 | efhc2 | coding | downstream | 39479 | 9713415 ~ 9734934 (-) |
| ndp | ndp | coding | downstream | 76389 | 9676683 ~ 9698024 (-) |
| mao | LOC106581942 | coding | downstream | 110947 | 9600179 ~ 9663466 (-) |
| LOC110501355 | LOC106581891 | coding | downstream | 195219 | 9577907 ~ 9579194 (-) |
| dipk2b | cssa21hxorf36 | coding | upstream | 54529 | 9829206 ~ 9836013 (-) |
| LOC118943652 | NA | coding | upstream | 108877 | 9883670 ~ 9883794 (-) |
| LOC118943578 | NA | coding | upstream | 129257 | 9878934 ~ 9912343 (-) |
| slc35a5 | slc35a5 | coding | upstream | 294750 | 10069543 ~ 10081799 (-) |
| vwa8 | vwa8 | coding | upstream | 368154 | 10142947 ~ 10236029 (-) |
| G1774410 | NA | non-coding | downstream | 106624 | 9667135 ~ 9667789 (-) |
| G1774395 | NA | non-coding | downstream | 122962 | 9651093 ~ 9651451 (-) |
| G1774352 | NA | non-coding | downstream | 220071 | 9554024 ~ 9554342 (-) |
| G1774525 | NA | non-coding | upstream | 89960 | 9864753 ~ 9864963 (-) |
| G1774527 | NA | non-coding | upstream | 91591 | 9866384 ~ 9866827 (-) |
| G1774528 | NA | non-coding | upstream | 92743 | 9867536 ~ 9867742 (-) |
| G1774497 | NA | non-coding | upstream | 103471 | 9878264 ~ 9878804 (-) |
| rpl8 | LOC106586796 | other | downstream | 482438 | 9289279 ~ 9291975 (-) |
| G1774133 | NA | other | downstream | 651164 | 9101752 ~ 9123249 (-) |
| gpr161a | gpr161 | other | downstream | 711212 | 9044945 ~ 9063520 (-) |
| LOC110502107 | grk1 | other | downstream | 1006366 | 8763292 ~ 8768047 (-) |
| G1777196 | LOC100136012 | other | upstream | 2066280 | 11841073 ~ 11843059 (-) |
| G1777286 | NA | other | upstream | 2266315 | 12041108 ~ 12041622 (-) |
| G1777441 | LOC106581914 | other | upstream | 2493424 | 12268217 ~ 12270114 (-) |
| LOC110501411 | LOC106581904 | other | upstream | 2845789 | 12620582 ~ 12624860 (-) |
| G1778140 | efnb2 | other | upstream | 3393987 | 13168780 ~ 13172979 (-) |
