Gene
RNA
| Item | Value |
|---|---|
| gene id | G1777118 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 11741851 ~ 11742305 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2035025 | True | 455 | lncRNA | 0.39 | 1 | 11741851 | 11742305 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| igfbp5 | igfbp5 | coding | downstream | 687259 | 11039501 ~ 11054592 (-) |
| LOC110501381 | NA | coding | downstream | 757637 | 10977273 ~ 10984214 (-) |
| col5a2a | LOC106581929 | coding | downstream | 901319 | 10775267 ~ 10840532 (-) |
| LOC110501376 | LOC106581931 | coding | downstream | 1190354 | 10502550 ~ 10551497 (-) |
| calcrla | LOC106581932 | coding | downstream | 1243674 | 10439675 ~ 10498177 (-) |
| LOC110501383 | LOC106581884 | coding | upstream | 73945 | 11816250 ~ 11819211 (-) |
| fkbp7 | fkbp7 | coding | upstream | 97271 | 11839576 ~ 11844296 (-) |
| nemp2 | LOC106581926 | coding | upstream | 121200 | 11863505 ~ 11874073 (-) |
| ofd1 | ofd1 | coding | upstream | 271362 | 12013667 ~ 12025374 (-) |
| LOC110501393 | LOC106581920 | coding | upstream | 288777 | 12031082 ~ 12034892 (-) |
| G1777116 | NA | non-coding | downstream | 1659 | 11739877 ~ 11740192 (-) |
| G1777114 | NA | non-coding | downstream | 3886 | 11737679 ~ 11737965 (-) |
| G1777113 | NA | non-coding | downstream | 5189 | 11736459 ~ 11736662 (-) |
| G1777081 | NA | non-coding | downstream | 49047 | 11692601 ~ 11692804 (-) |
| G1777079 | NA | non-coding | downstream | 52676 | 11688952 ~ 11689175 (-) |
| G1777119 | NA | non-coding | upstream | 274 | 11742579 ~ 11742845 (-) |
| G1777147 | NA | non-coding | upstream | 34071 | 11776376 ~ 11776815 (-) |
| G1777152 | NA | non-coding | upstream | 37191 | 11779496 ~ 11779714 (-) |
| G1777220 | NA | non-coding | upstream | 152023 | 11894328 ~ 11894624 (-) |
| G1777247 | NA | non-coding | upstream | 193645 | 11935950 ~ 11938037 (-) |
| fundc1 | fundc1 | other | downstream | 2003995 | 9635535 ~ 9737896 (-) |
| rpl8 | LOC106586796 | other | downstream | 2449876 | 9289279 ~ 9291975 (-) |
| G1774133 | NA | other | downstream | 2618602 | 9101752 ~ 9123249 (-) |
| gpr161a | gpr161 | other | downstream | 2678650 | 9044945 ~ 9063520 (-) |
| LOC110502107 | grk1 | other | downstream | 2973804 | 8763292 ~ 8768047 (-) |
| G1777196 | LOC100136012 | other | upstream | 98768 | 11841073 ~ 11843059 (-) |
| G1777286 | NA | other | upstream | 298803 | 12041108 ~ 12041622 (-) |
| G1777441 | LOC106581914 | other | upstream | 525912 | 12268217 ~ 12270114 (-) |
| LOC110501411 | LOC106581904 | other | upstream | 878277 | 12620582 ~ 12624860 (-) |
| G1778140 | efnb2 | other | upstream | 1426475 | 13168780 ~ 13172979 (-) |
