Gene
RNA
| Item | Value |
|---|---|
| gene id | G1801604 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 33285211 ~ 33285516 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2061539 | True | 306 | lncRNA | 0.37 | 1 | 33285211 | 33285516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501785 | LOC100194642 | coding | downstream | 104836 | 33171242 ~ 33180375 (-) |
| LOC110501778 | LOC106586454 | coding | downstream | 403107 | 32855959 ~ 32882104 (-) |
| LOC118943602 | NA | coding | downstream | 1106206 | 32178641 ~ 32179005 (-) |
| ube2e3 | ub2e3 | coding | downstream | 1286860 | 31944574 ~ 31998351 (-) |
| itga4 | itga4 | coding | downstream | 1511199 | 31736087 ~ 31774012 (-) |
| LOC110502092 | erbb4 | coding | upstream | 116232 | 33401748 ~ 33509768 (-) |
| LOC118936582 | erbb4 | coding | upstream | 212148 | 33497664 ~ 33632178 (-) |
| LOC110501786 | LOC106586446 | coding | upstream | 401666 | 33687182 ~ 33927932 (-) |
| LOC110502093 | LOC106582292 | coding | upstream | 665537 | 33951053 ~ 33983502 (-) |
| bard1 | bard1 | coding | upstream | 1188104 | 34473620 ~ 34544232 (-) |
| G1801599 | NA | non-coding | downstream | 2619 | 33282335 ~ 33282592 (-) |
| G1801595 | NA | non-coding | downstream | 6512 | 33278367 ~ 33278699 (-) |
| G1801586 | NA | non-coding | downstream | 17056 | 33267946 ~ 33268155 (-) |
| G1801582 | NA | non-coding | downstream | 18830 | 33266157 ~ 33266381 (-) |
| G1801548 | NA | non-coding | downstream | 40428 | 33244570 ~ 33244783 (-) |
| G1801635 | NA | non-coding | upstream | 23287 | 33308803 ~ 33309004 (-) |
| G1802135 | NA | non-coding | upstream | 192525 | 33478041 ~ 33478257 (-) |
| G1802139 | NA | non-coding | upstream | 196013 | 33481529 ~ 33482031 (-) |
| G1802472 | NA | non-coding | upstream | 689207 | 33974723 ~ 33974942 (-) |
| G1802475 | NA | non-coding | upstream | 691987 | 33977503 ~ 33977736 (-) |
| G1801331 | NA | other | downstream | 324726 | 32958322 ~ 32960485 (-) |
| G1801352 | NA | other | downstream | 331541 | 32950467 ~ 32953670 (-) |
| G1801071 | NA | other | downstream | 507434 | 32759858 ~ 32777777 (-) |
| G1801195 | NA | other | downstream | 580888 | 32703800 ~ 32704323 (-) |
| LOC110501748 | LOC106582253 | other | downstream | 2242995 | 31037006 ~ 31042302 (-) |
| G1803964 | NA | other | upstream | 1840963 | 35126479 ~ 35126833 (-) |
| LOC110502094 | LOC106582301 | other | upstream | 1921947 | 35138330 ~ 35471205 (-) |
| G1805927 | LOC106582360 | other | upstream | 2772328 | 36057844 ~ 36059768 (-) |
| LOC110501806 | sema5b | other | upstream | 3292232 | 36552698 ~ 36837583 (-) |
