Gene
RNA
| Item | Value |
|---|---|
| gene id | G1802480 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 33986231 ~ 33986560 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2062466 | True | 330 | lncRNA | 0.52 | 1 | 33986231 | 33986560 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502093 | LOC106582292 | coding | downstream | 2729 | 33951053 ~ 33983502 (-) |
| LOC110501786 | LOC106586446 | coding | downstream | 58299 | 33687182 ~ 33927932 (-) |
| LOC118936582 | erbb4 | coding | downstream | 354053 | 33497664 ~ 33632178 (-) |
| LOC110502092 | erbb4 | coding | downstream | 476463 | 33401748 ~ 33509768 (-) |
| LOC110501785 | LOC100194642 | coding | downstream | 805856 | 33171242 ~ 33180375 (-) |
| bard1 | bard1 | coding | upstream | 487060 | 34473620 ~ 34544232 (-) |
| LOC110501791 | LOC106582296 | coding | upstream | 599140 | 34585700 ~ 34592688 (-) |
| LOC110502094 | LOC106582301 | coding | upstream | 1151770 | 35138330 ~ 35471205 (-) |
| LOC110501794 | ralb | coding | upstream | 1711026 | 35697586 ~ 35738804 (-) |
| tfcp2l1 | tf2l1 | coding | upstream | 2106628 | 36093188 ~ 36102895 (-) |
| G1802477 | NA | non-coding | downstream | 5390 | 33980501 ~ 33980841 (-) |
| G1802475 | NA | non-coding | downstream | 8495 | 33977503 ~ 33977736 (-) |
| G1802472 | NA | non-coding | downstream | 11289 | 33974723 ~ 33974942 (-) |
| G1802139 | NA | non-coding | downstream | 504200 | 33481529 ~ 33482031 (-) |
| G1802135 | NA | non-coding | downstream | 507974 | 33478041 ~ 33478257 (-) |
| G1802485 | NA | non-coding | upstream | 4917 | 33991477 ~ 33991704 (-) |
| G1802498 | NA | non-coding | upstream | 13264 | 33999824 ~ 34000082 (-) |
| G1802500 | NA | non-coding | upstream | 15414 | 34001974 ~ 34002197 (-) |
| G1802676 | NA | non-coding | upstream | 43393 | 34029953 ~ 34036761 (-) |
| G1802695 | NA | non-coding | upstream | 78417 | 34064977 ~ 34112698 (-) |
| G1801331 | NA | other | downstream | 1025746 | 32958322 ~ 32960485 (-) |
| G1801352 | NA | other | downstream | 1032561 | 32950467 ~ 32953670 (-) |
| G1801071 | NA | other | downstream | 1208454 | 32759858 ~ 32777777 (-) |
| G1801195 | NA | other | downstream | 1281908 | 32703800 ~ 32704323 (-) |
| LOC110501748 | LOC106582253 | other | downstream | 2944015 | 31037006 ~ 31042302 (-) |
| G1803964 | NA | other | upstream | 1139919 | 35126479 ~ 35126833 (-) |
| G1805927 | LOC106582360 | other | upstream | 2071284 | 36057844 ~ 36059768 (-) |
| LOC110501806 | sema5b | other | upstream | 2591188 | 36552698 ~ 36837583 (-) |
