G1803400


Basic Information

Item Value
gene id G1803400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 34671369 ~ 34672336 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2063449
gagagagcgagagcgagctagagagagagcgagagcgagcgagagcgaaagctagagcgagagcgagctagagcgagagcgagagggaaagctagagagagagctagagcgagagcgagagcgagctagagcgagagcgagctagagcgagagcgagagcgagctagagcgagagcgagagcgagagcgagctagtgagagagcgagagcgagagcgagctagagagagagcgagctagagcgagagcgagctagagagagagcgagctagagcgagagcgagctagagagagagcgagagcgagctagagagagagcgagagcgagctagagagagagcgagagcgagctagagagagagcgagagcgagctagagagagagcgagagcgagctagagagagcgagagcgagctagagagagcgagagcgagctagagagagagcaagagcgagctagagagagagcgagagcgagctagagagagagcgagagcgagctagagagagagcgagagcgagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2063449 True 522 lncRNA 0.60 2 34671369 34672336

Neighbor

gene id symbol gene type direction distance location
LOC110501791 LOC106582296 coding downstream 78681 34585700 ~ 34592688 (-)
bard1 bard1 coding downstream 127137 34473620 ~ 34544232 (-)
LOC110502093 LOC106582292 coding downstream 687867 33951053 ~ 33983502 (-)
LOC110501786 LOC106586446 coding downstream 743437 33687182 ~ 33927932 (-)
LOC118936582 erbb4 coding downstream 1039191 33497664 ~ 33632178 (-)
LOC110502094 LOC106582301 coding upstream 465994 35138330 ~ 35471205 (-)
LOC110501794 ralb coding upstream 1025250 35697586 ~ 35738804 (-)
tfcp2l1 tf2l1 coding upstream 1420852 36093188 ~ 36102895 (-)
LOC110502096 LOC106582358 coding upstream 1433711 36106047 ~ 36228129 (-)
nifk mk67i coding upstream 1556025 36228361 ~ 36232090 (-)
G1803399 NA non-coding downstream 77 34669839 ~ 34671292 (-)
G1803393 NA non-coding downstream 14007 34639972 ~ 34657362 (-)
G1803395 NA non-coding downstream 19383 34644638 ~ 34651986 (-)
G1803329 NA non-coding downstream 87339 34583565 ~ 34584030 (-)
G1803350 NA non-coding downstream 101495 34569622 ~ 34569874 (-)
G1803441 LOC106582299 non-coding upstream 87579 34759915 ~ 34768728 (-)
G1803492 LOC106586437 non-coding upstream 116216 34788552 ~ 34790496 (-)
G1803522 NA non-coding upstream 151377 34823713 ~ 34824011 (-)
G1803524 LOC106613263 non-coding upstream 152606 34824942 ~ 34825240 (-)
G1803526 NA non-coding upstream 152995 34825331 ~ 34825717 (-)
G1801331 NA other downstream 1710884 32958322 ~ 32960485 (-)
G1801352 NA other downstream 1717699 32950467 ~ 32953670 (-)
G1801071 NA other downstream 1893592 32759858 ~ 32777777 (-)
G1801195 NA other downstream 1967046 32703800 ~ 32704323 (-)
G1803964 NA other upstream 454143 35126479 ~ 35126833 (-)
G1805927 LOC106582360 other upstream 1385508 36057844 ~ 36059768 (-)
LOC110501806 sema5b other upstream 1905412 36552698 ~ 36837583 (-)
G1806393 NA other upstream 2263322 36935658 ~ 36936087 (-)

Expression


Co-expression Network