G1806177


Basic Information

Item Value
gene id G1806177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36569614 ~ 36657977 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2066444
ttcgggtagccttccacaagcttcccacaataagtcgggtgaattttggcccattcctcctgacagagctggtgtaaatgagtcaggtttgtaggcctcctggctcgcacacgctttttcagttctgcccacaaattgtctataggattgaggtcagggctttgtgatggccactccaataccttgactttgttgtccttaagccattttgccacgactttggaagtatgcttggggtcattgtccatttggaatacccatttgcaaccaatttgcttcaatatatccacaaaatgttcctacctcatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2066444 True 309 lncRNA 0.46 2 36569614 36657977

Neighbor

gene id symbol gene type direction distance location
hspbap1 hspbap1 coding downstream 128252 36405741 ~ 36441362 (-)
LOC110502097 LOC106582309 coding downstream 251229 36248076 ~ 36318385 (-)
nifk mk67i coding downstream 337524 36228361 ~ 36232090 (-)
LOC110501809 adcy5 coding upstream 322119 36980096 ~ 37099621 (-)
hacd2 hacd2 coding upstream 447508 37105485 ~ 37117837 (-)
LOC110501816 LOC106582342 coding upstream 700167 37358144 ~ 37390316 (-)
LOC110501817 LOC106582339 coding upstream 741093 37399070 ~ 37411510 (-)
LOC110501818 LOC106582337 coding upstream 774956 37432933 ~ 37528626 (-)
G1806092 NA non-coding downstream 57164 36441701 ~ 36512450 (-)
G1806050 NA non-coding downstream 224084 36343157 ~ 36345530 (-)
G1806014 NA non-coding downstream 282258 36280386 ~ 36287356 (-)
G1805967 tsn non-coding downstream 321801 36243199 ~ 36247813 (-)
G1805983 NA non-coding downstream 350143 36218741 ~ 36219471 (-)
G1806316 NA non-coding upstream 131778 36789755 ~ 36789992 (-)
G1806343 pdia5 non-coding upstream 180847 36838824 ~ 36858166 (-)
G1806356 NA non-coding upstream 196647 36854624 ~ 36855249 (-)
G1806358 NA non-coding upstream 256366 36914343 ~ 36917210 (-)
G1806386 NA non-coding upstream 264628 36922605 ~ 36923054 (-)
G1805927 LOC106582360 other downstream 509846 36057844 ~ 36059768 (-)
LOC110502094 LOC106582301 other downstream 1349915 35138330 ~ 35471205 (-)
G1803964 NA other downstream 1442781 35126479 ~ 35126833 (-)
bard1 bard1 other downstream 2029441 34473620 ~ 34544232 (-)
G1801331 NA other downstream 3609129 32958322 ~ 32960485 (-)
G1806393 NA other upstream 277681 36935658 ~ 36936087 (-)
G1806449 NA other upstream 385584 37043561 ~ 37112474 (-)
G1807020 LOC105030512 other upstream 1101994 37759971 ~ 37760248 (-)
G1807750 LOC106582372 other upstream 1535445 38193422 ~ 38195096 (-)
G1807731 NA other upstream 1550813 38208790 ~ 38241273 (-)

Expression


Co-expression Network