Gene
RNA
| Item | Value |
|---|---|
| gene id | G1806558 |
| gene name | LOC106582344 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 37231320 ~ 37232061 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ADP-ribosylation factor-like protein 5A isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2066852 | True | 516 | lncRNA | 0.45 | 2 | 37231320 | 37232061 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hacd2 | hacd2 | coding | downstream | 113483 | 37105485 ~ 37117837 (-) |
| LOC110501809 | adcy5 | coding | downstream | 131699 | 36980096 ~ 37099621 (-) |
| LOC110501806 | sema5b | coding | downstream | 393737 | 36552698 ~ 36837583 (-) |
| hspbap1 | hspbap1 | coding | downstream | 789958 | 36405741 ~ 36441362 (-) |
| LOC110502097 | LOC106582309 | coding | downstream | 912935 | 36248076 ~ 36318385 (-) |
| LOC110501816 | LOC106582342 | coding | upstream | 126083 | 37358144 ~ 37390316 (-) |
| LOC110501817 | LOC106582339 | coding | upstream | 167009 | 37399070 ~ 37411510 (-) |
| LOC110501818 | LOC106582337 | coding | upstream | 200872 | 37432933 ~ 37528626 (-) |
| LOC110501819 | LOC106582336 | coding | upstream | 313665 | 37545726 ~ 37575934 (-) |
| LOC110502101 | LOC106582334 | coding | upstream | 344354 | 37576415 ~ 37723467 (-) |
| G1806539 | LOC106582346 | non-coding | downstream | 9455 | 37218976 ~ 37221865 (-) |
| G1806535 | NA | non-coding | downstream | 39264 | 37191055 ~ 37192056 (-) |
| G1806511 | NA | non-coding | downstream | 79458 | 37151656 ~ 37151862 (-) |
| G1806403 | NA | non-coding | downstream | 258380 | 36962661 ~ 36972940 (-) |
| G1806401 | NA | non-coding | downstream | 285862 | 36944865 ~ 36945458 (-) |
| G1806590 | LOC106600293 | non-coding | upstream | 57057 | 37289118 ~ 37293571 (-) |
| G1806609 | NA | non-coding | upstream | 115451 | 37347512 ~ 37349257 (-) |
| G1806686 | NA | non-coding | upstream | 243902 | 37475963 ~ 37482618 (-) |
| G1806687 | NA | non-coding | upstream | 244275 | 37476336 ~ 37483685 (-) |
| G1806708 | NA | non-coding | upstream | 297304 | 37529365 ~ 37529684 (-) |
| G1806449 | NA | other | downstream | 118846 | 37043561 ~ 37112474 (-) |
| G1806393 | NA | other | downstream | 295233 | 36935658 ~ 36936087 (-) |
| G1805927 | LOC106582360 | other | downstream | 1171552 | 36057844 ~ 36059768 (-) |
| LOC110502094 | LOC106582301 | other | downstream | 2011621 | 35138330 ~ 35471205 (-) |
| G1807020 | LOC105030512 | other | upstream | 527910 | 37759971 ~ 37760248 (-) |
| G1807750 | LOC106582372 | other | upstream | 961361 | 38193422 ~ 38195096 (-) |
| G1807731 | NA | other | upstream | 976729 | 38208790 ~ 38241273 (-) |
| LOC110502145 | LOC106586333 | other | upstream | 1343805 | 38520872 ~ 38726596 (-) |
| G1808299 | NA | other | upstream | 1712075 | 38944136 ~ 38944530 (-) |
