G1806687


Basic Information

Item Value
gene id G1806687
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37476336 ~ 37483685 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2067007
ATAAAAGTAAAGAATATTGAACTGAACAAGGCAATTTCAACAAAAATGCAGATAgaacctgcctagttaaataaaaaataaaataaccttatagtcccaagctctATTACAAAGACTACAGACATGCTAAACACCATATGTGGGGTAGTGCCAGaggtacctttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctgggaacagtgggttaactgcctgttcggaGGCAGAAATATACAGTGGGATTAGTGTGGTAGTCCAAAAAGAACAGGCCTAACTGGAACGAAGCTAATACCAGTACTCAAGATGTCCCAATCACCATCATGATTTGTAACTCCTGCTAACACCAACTGTAGCACCTACTCTTTCTGTAGTAGTAGTCGTCGGATTTCATTCAATCACTTTTGTTTTTGATTGGAACATAGTTTGAGCAGGATCTGAGGTTCTACAAGGCTGACGCAGAAGTTCATTAAACATTTTGGCACAGCAGTGGAGTCAATTAGTGCTTTATTTGTTGTAATTTGAACACACAGCAATTAGTAGGCAATCTGTTCTGGGTTAATgcttgacaacatgtaaactaccGAGCTCAGCAAAGAGCTGTGAGCACAAACGTGCCTAACATATTgctgtacgtatgtgtgtgtttgatcaTTTTGTCCCTTACcaagtgtcccctctcccttgcTAGGCCCCTGAAACTCCCTTGTCCCCTCACAACCCCCCTCAAACCTGACTGAACCTGACCAGGATAAAGACCCATACTCCCTCAGGATTGTtgtttctccactctctcctttAACTATAGACACAATAGAAGCCACTCTCCTCCCGTGCCTGCTGTGTTTGGGGCTGGTCTTGCCTCTTAGAAATACTTCAAATACAAGGATCTCCCTCTCAACCCCCGTGTCTGCCATGTAATAAAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2067007 True 949 lncRNA 0.42 2 37476336 37483685

Neighbor

gene id symbol gene type direction distance location
LOC110501817 LOC106582339 coding downstream 64826 37399070 ~ 37411510 (-)
LOC110501816 LOC106582342 coding downstream 86020 37358144 ~ 37390316 (-)
hacd2 hacd2 coding downstream 358499 37105485 ~ 37117837 (-)
LOC110501809 adcy5 coding downstream 376715 36980096 ~ 37099621 (-)
LOC110501806 sema5b coding downstream 638753 36552698 ~ 36837583 (-)
LOC110501819 LOC106582336 coding upstream 62041 37545726 ~ 37575934 (-)
LOC110502101 LOC106582334 coding upstream 92730 37576415 ~ 37723467 (-)
LOC110501826 NA coding upstream 279155 37762840 ~ 37765227 (-)
LOC110501827 LOC106582332 coding upstream 285975 37769660 ~ 37770890 (-)
LOC118943607 LOC106582311 coding upstream 295586 37779271 ~ 37779640 (-)
G1806609 NA non-coding downstream 127079 37347512 ~ 37349257 (-)
G1806590 LOC106600293 non-coding downstream 182765 37289118 ~ 37293571 (-)
G1806558 LOC106582344 non-coding downstream 244275 37231320 ~ 37232061 (-)
G1806539 LOC106582346 non-coding downstream 254471 37218976 ~ 37221865 (-)
G1806535 NA non-coding downstream 284280 37191055 ~ 37192056 (-)
G1806708 NA non-coding upstream 45680 37529365 ~ 37529684 (-)
G1806717 NA non-coding upstream 55615 37539300 ~ 37539499 (-)
G1807018 NA non-coding upstream 275173 37758858 ~ 37759135 (-)
G1806449 NA other downstream 363862 37043561 ~ 37112474 (-)
G1806393 NA other downstream 540249 36935658 ~ 36936087 (-)
G1805927 LOC106582360 other downstream 1416568 36057844 ~ 36059768 (-)
LOC110502094 LOC106582301 other downstream 2256637 35138330 ~ 35471205 (-)
G1807020 LOC105030512 other upstream 276286 37759971 ~ 37760248 (-)
G1807750 LOC106582372 other upstream 709737 38193422 ~ 38195096 (-)
G1807731 NA other upstream 725105 38208790 ~ 38241273 (-)
LOC110502145 LOC106586333 other upstream 1092181 38520872 ~ 38726596 (-)
G1808299 NA other upstream 1460451 38944136 ~ 38944530 (-)

Expression


Co-expression Network