G1807607


Basic Information

Item Value
gene id G1807607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37927837 ~ 37928265 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2068078
agtggaggtgttgttgtctaccctctgtgttgaggatcagcatagtggaggtgttgttgcctagctaccctctgtgttgaggatcagcatagtgcaggtgttgttgcctagctaccctctgtgttgaggatcagcatagtggaggtgttgttgcctagctaccctctgtgttgaggatcagcatagtggaggtgttgttgcctagctaccctctgtgttgaggatcagcatagtggaggtgttgttgcctagctACCCtctgtgttgaagatcagcatAGTGGAAGTGTTGT
>TU2068079
agtggaggtgttgttgtctaccctctgtgttgaggatcagcatagtggaggtgttgttgcctagctaccctctgtgttgaggatcagcatagtgcaggtgttgttgcctagctaccctctgtgttgagaatcagcgtagtagaggtgttgttgcctagctaccctctgtgttgaggatcagcatagtggaggtgttgttgcctagctACCCtctgtgttgaagatcagcatAGTGGAAGTGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2068078 False 292 lncRNA 0.50 2 37927837 37928265
TU2068079 True 245 lncRNA 0.49 2 37927837 37928265

Neighbor

gene id symbol gene type direction distance location
LOC110501831 LOC106582318 coding downstream 66929 37851828 ~ 37860908 (-)
LOC110502128 LOC106582310 coding downstream 87161 37839001 ~ 37840676 (-)
LOC110502140 LOC106582322 coding downstream 92665 37834053 ~ 37835172 (-)
LOC110502127 LOC106582319 coding downstream 96352 37830542 ~ 37831485 (-)
LOC110501821 LOC106582326 coding downstream 127746 37798979 ~ 37800091 (-)
LOC110501835 LOC106586372 coding upstream 43947 37972212 ~ 37995938 (-)
LOC110501838 LOC100136430 coding upstream 76564 38004829 ~ 38012137 (-)
LOC110501839 rftn2 coding upstream 101237 38029502 ~ 38063991 (-)
LOC110502144 LOC106586344 coding upstream 376203 38304468 ~ 38383049 (-)
LOC110501845 LOC106582367 coding upstream 509919 38438184 ~ 38450743 (-)
G1807588 NA non-coding downstream 53977 37872767 ~ 37873860 (-)
G1807587 LOC100380630 non-coding downstream 60900 37864964 ~ 37866937 (-)
G1807075 NA non-coding downstream 77463 37850101 ~ 37850374 (-)
G1807074 NA non-coding downstream 79069 37848033 ~ 37848768 (-)
G1807673 NA non-coding upstream 142601 38070866 ~ 38072483 (-)
G1807754 NA non-coding upstream 273736 38202001 ~ 38202385 (-)
G1807731 NA non-coding upstream 280525 38208790 ~ 38241273 (-)
G1807785 NA non-coding upstream 370919 38299184 ~ 38300194 (-)
G1807805 NA non-coding upstream 383990 38312255 ~ 38312661 (-)
G1807020 LOC105030512 other downstream 167589 37759971 ~ 37760248 (-)
G1806449 NA other downstream 815363 37043561 ~ 37112474 (-)
G1806393 NA other downstream 991750 36935658 ~ 36936087 (-)
LOC110501806 sema5b other downstream 1349126 36552698 ~ 36837583 (-)
G1805927 LOC106582360 other downstream 1868069 36057844 ~ 36059768 (-)
G1807750 LOC106582372 other upstream 265157 38193422 ~ 38195096 (-)
LOC110502145 LOC106586333 other upstream 647601 38520872 ~ 38726596 (-)
G1808299 NA other upstream 1015871 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 2808383 40736648 ~ 40813437 (-)

Expression


Co-expression Network