XLOC_037229 (acp6)


Basic Information

Item Value
gene id XLOC_037229
gene name acp6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 30478768 ~ 30490414 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073270
ATGAGTGGTGTTCAAAACCAGTGGAATTAACTCTGCCGGCTGTAAAACCTTCAGGTGCATCATGTGGGCACGGGTGGGTCTCGTGGGTTCAGTGGCCCTCGGGTCAGTGTTCTGGTTTCAAAAGAATAAAACTGAAGCCTCTCCATATGAGCTCAAATTAATTCAGGTTTTATTCCGACATGGAGCGAGGACGCCACTGAAATCCATACCAGATGTTTTGGAGGCACAATGGTCCCCTGAGCTACTTGAAGCGCCTGCGCACACAAAAATAGACTATATGGTTACAGACCTGGAGGGCGGGCCCAGACCACCAGCTCCTGTGGAGGACAGCTACAGAGCCAAAATATTGACAGGTGGAACTTATCCAGGTCAGCTGACCACAATAGGCATGCAGCAGCTGTATGATCTGGGAGTGAGGTTACGAAAGAAATACATCCAGGAGGAGCCCTTTCTTACGCCTACTTTCAACCCTAAAGAAGTATACATTCGCTCTACCAACATTGTACGCACCATTGAGTCAGCTAAGTGTTTGGTGGCTGGATTGTTTCAACAGGAGCAGGCAGGTGTTGTGTCCATCCTCACCGATAAGGCTGAGAAGGAAGTCCTCTATCCCAACTATCATGGATGCAAGCTGCTCAAGATGCTCATCGGCAATCGTTGGGCAGAATCATCCACACTTCCTGACATTGCTGCAGACCTGCAGAACATCCAGGACGATTTGGGTGTGGATGCTCAACAGCGTCTCGACTTCATCCTCATCCGAGATGACATGGTGGCCAGAGAGACCCATGGCCTGCCACTTCCTACAGTTCTGGAGCAGTGGAGAAGTACCATAGAGCAGAGAGCAGTCGATATGATATACCACATCTATGAGCCCAGTAAAAGGCAGAATTTGCAGATGTGCGTGGGTCCACTATTGAACATGCTCGTAACCAACATGGAGGACAAAATACAAAGCTCCCCCTCTAAACAAGACAGAAAGCTGTTCCTGTACTCTGTGCACGACACCACTCTGATGCCATGTCTGATGGCTTTGGGGGTTTTTGACATGAAGTGGCCACCGTATGCAGCTGACATCACACTGGAGCTTTACCAGCACCGGCAAACTAACCAGCACTATGTAAAAGTCTCTTACATTGACCAGGACCAAAAAATCCCAGGCTGCAGTAACATCTACTGCCCAATAGATGAGTTTAAGGCGGCAATGGCTGTTCATTCTCTACCTGACGACCGTTACTATGCGCTCTGTGAAAGTGCAGATGACAAGCGCAAACTCTGATCTTCCAACAGCTCTCAACTCCCAGAAAACCAAGATTTTTTGGATTTGTCTGGGCTAAAAAACCTGGAGCTTTGGTCTCTTTTACATGGACtcaaatgtttatattcacaTAGACCAGTATTatggatgatgaatgaatgaaacaaacagGAAAATGATGTTTATCACAGGTTGATGACATTGACACGTCATAATATTGAGCATACATTTTATGAGCCAAAATATTAatagtgtgtgtgaatttatTCAAAAGGGAGGtagtttgtaacatttttattaggtgccttcatttttttcagtgtcagTCATCTGAAACTGCTCCAGAATTTTGCTgcaaactcatttttaataatgacatttgatgtTTAAGCATCTGATTAAGCGCTGATAATGGTAATATGCAAGTTAAACTGGTGAACACTTTCTTACATGTTCACTACCACTATGCATATTAAATTATACACaattaaaaagaaatgttttaaacGTTA

Function

symbol description
acp6 Predicted to enable lysophosphatidic acid phosphatase activity. Predicted to be involved in dephosphorylation and lysobisphosphatidic acid metabolic process. Predicted to be active in mitochondrion. Orthologous to human ACP6 (acid phosphatase 6, lysophosphatidic).

GO:

id name namespace
GO:2001311 lysobisphosphatidic acid metabolic process biological_process
GO:0016311 dephosphorylation biological_process
GO:0005575 cellular_component cellular_component
GO:0005739 mitochondrion cellular_component
GO:0052642 lysophosphatidic acid phosphatase activity molecular_function
GO:0016791 phosphatase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-290 Predicted to enable lysophosphatidic acid phosphatase activity. Predicted to be involved in dephosphorylation and lysobisphosphatidic acid metabolic process. Predicted to be active in mitochondrion. Orthologous to human ACP6 (acid phosphatase 6, lysophosphatidic).

Ensembl:

ensembl_id ENSDARG00000040064

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073270 True 1770 mRNA 0.44 11 30478768 30490414

Neighbor

gene id symbol gene type direction distance location
XLOC_037228 gja5a coding upstream 1457 30464641 ~ 30477311 (+)
XLOC_037227 zgc:113314 coding upstream 51651 30421489 ~ 30427117 (+)
XLOC_037226 si:dkey-18p12.4 coding upstream 86023 30387916 ~ 30392745 (+)
XLOC_037225 srpx coding upstream 161978 30294073 ~ 30316790 (+)
XLOC_037224 rpgra coding upstream 190322 30274637 ~ 30288446 (+)
XLOC_037230 commd6 coding downstream 87511 30577925 ~ 30582236 (+)
XLOC_037231 tbc1d4 coding downstream 95138 30585552 ~ 30639362 (+)
XLOC_037232 BX571809.3 coding downstream 204869 30695283 ~ 30716906 (+)
XLOC_037233 klf12b coding downstream 229634 30720048 ~ 30783892 (+)
XLOC_037234 dachd coding downstream 329876 30820290 ~ 31062704 (+)
XLOC_037223 NA non-coding upstream 213345 30264357 ~ 30265423 (+)
XLOC_037222 NA non-coding upstream 229344 30248495 ~ 30249424 (+)
XLOC_037219 NA non-coding upstream 323488 30154784 ~ 30155280 (+)
XLOC_037214 BX649442.1 non-coding upstream 784569 29690678 ~ 29694199 (+)
XLOC_037212 NA non-coding upstream 809150 29662709 ~ 29669618 (+)
XLOC_037236 NA non-coding downstream 774460 31264874 ~ 31269143 (+)
XLOC_037237 NA non-coding downstream 789987 31280401 ~ 31342609 (+)
XLOC_037238 NA non-coding downstream 856623 31347037 ~ 31428734 (+)
XLOC_037239 BX571700.1 non-coding downstream 1005234 31495648 ~ 31495765 (+)

Expression


Co-expression Network