G1807785


Basic Information

Item Value
gene id G1807785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 38299184 ~ 38300194 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2068284
AGTTGGATGGGGAAGGGGCCGATATGAGTTGGATGGGGAAGGGGCCGATATTTCCTGTTTTGTTTTCTTTCAGTGCCTCTTGACTAAAGCACAATGTTCCATCAAACCTGTCTGAAACAATGCATTCAGATGGGTAACTGTCCTTTCTGAAACAATGCATTCAGATGGGTAACTGTCCTTTCTGAAACAATTCATTCAGACGGGTAACTCTCCTTACTGAAACAATTCATTCAGATGGGTAACTCTCCTTACTGAAACAATGCATTCAGATGGGTAACTCTCCTTACTGAAACAATGCATTCAGATGGGTAACTCTCCTTACTGAAACAATGCATTCAGACGGGTAACTCTCCTTACTGAAACAATTCATTCAGACGGGTAACTGTCCTTTCTGAAACAATGCATTCAGACGGGTAACTGTCCTTTCTGAAACAATGCATTCAGACGGGTAACTCTCCTTACTGAAACAATTCATTCAGACGGGTAACTGTCCTTACTGAAACAATGCATTCAGACGGGTAACTCTCCTTTCTGAAACAATGCATTCAGATGGGTAACTGTCCTTTCTGAAACAATGCATTCAGACGGGTAACTCTCCTTTCTGAAACAATGCATTCAGACGGGTAACTCTCCTTACTGAAACAATTAATTCAGACGGGTAACTCTACTTAACTAATAGTTCTTATTCAAATGATCAGTTCTGCAGCCATCATTCCTCTTCTTCACCAACTTCATCATTGCCGACAATGTGAATCAGAATTTCTGTCTGGTACTTTTTGCATTCCCTGTTTAATCATGCCAGTTATCACTAAGTGATCATTAAAACGTCTTATGTGCATTAATCTTGAGGttcttgtgtttttgttttatttttttgtcgatatttttattttatttttcaaattgctGTCGTTGTTTAAATAAAGTGCATCCAATGAAAA

Function

NR:

description
PREDICTED: GATA zinc finger domain-containing protein 14-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2068284 True 941 lncRNA 0.39 2 38299184 38300194

Neighbor

gene id symbol gene type direction distance location
LOC110501839 rftn2 coding downstream 235193 38029502 ~ 38063991 (-)
LOC110501838 LOC100136430 coding downstream 287047 38004829 ~ 38012137 (-)
LOC110501835 LOC106586372 coding downstream 303246 37972212 ~ 37995938 (-)
LOC110502141 LOC106582316 coding downstream 331899 37903148 ~ 37967285 (-)
LOC110501831 LOC106582318 coding downstream 438276 37851828 ~ 37860908 (-)
LOC110502144 LOC106586344 coding upstream 4274 38304468 ~ 38383049 (-)
LOC110501845 LOC106582367 coding upstream 137990 38438184 ~ 38450743 (-)
LOC110501846 NA coding upstream 166997 38467191 ~ 38472484 (-)
LOC110501850 dbr1 coding upstream 185627 38485821 ~ 38491495 (-)
LOC110502145 LOC106586333 coding upstream 220678 38520872 ~ 38726596 (-)
G1807731 NA non-coding downstream 57911 38208790 ~ 38241273 (-)
G1807754 NA non-coding downstream 96799 38202001 ~ 38202385 (-)
G1807673 NA non-coding downstream 226701 38070866 ~ 38072483 (-)
G1807607 NA non-coding downstream 370919 37927837 ~ 37928265 (-)
G1807588 NA non-coding downstream 425324 37872767 ~ 37873860 (-)
G1807805 NA non-coding upstream 12061 38312255 ~ 38312661 (-)
G1807893 NA non-coding upstream 203664 38503858 ~ 38504231 (-)
G1807917 NA non-coding upstream 259748 38559942 ~ 38560352 (-)
G1807918 NA non-coding upstream 263986 38564180 ~ 38564943 (-)
G1807922 NA non-coding upstream 280890 38581084 ~ 38597380 (-)
G1807750 LOC106582372 other downstream 104088 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 538936 37759971 ~ 37760248 (-)
G1806449 NA other downstream 1186710 37043561 ~ 37112474 (-)
G1806393 NA other downstream 1363097 36935658 ~ 36936087 (-)
G1808299 NA other upstream 643942 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 2436454 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 3147705 41447899 ~ 41523764 (-)
G1811042 NA other upstream 3304780 41604974 ~ 41605231 (-)

Expression


Co-expression Network