G1807918


Basic Information

Item Value
gene id G1807918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 38564180 ~ 38564943 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2068435
ctgtacagtaacatgctatacatgacatcagagctcagtgtctgtacagtaacacagtaacatgctatacatgacatcagtgtctgtacagtaacatgctatacatgacatcagtgtctgtacagtaacatgctatacatgacatcagtgtctgtacagtaacacagtaacatgctatacatgacatcagtgtctgtacagtaacatgctatacatgacattagagctcagtgtctgtacagtaacacagtaacatgctatacatgacatcagtgtctgtacagtaacacagtaacatgctatacatgacatcagtgtctgtacagtaacatgctatacatgacatcagagctcagtggctgtacagtaacatgctatacatgacgtcagtgtctgtacagtaacatgctatacatgacatcagtgtctgtacagtaacatgctatacatgacatcagtgtctgtacagtaacatgctatacatgacatcagtgtctgtacagtaacatgctatacatgacatcagagctcagtgtctgtacagtaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2068435 True 549 lncRNA 0.39 2 38564180 38564943

Neighbor

gene id symbol gene type direction distance location
LOC110501850 dbr1 coding downstream 72685 38485821 ~ 38491495 (-)
LOC110501846 NA coding downstream 91696 38467191 ~ 38472484 (-)
LOC110501845 LOC106582367 coding downstream 113437 38438184 ~ 38450743 (-)
LOC110502144 LOC106586344 coding downstream 181131 38304468 ~ 38383049 (-)
LOC110501839 rftn2 coding downstream 500189 38029502 ~ 38063991 (-)
ccnyl1 LOC106582379 coding upstream 309471 38874414 ~ 38892741 (-)
LOC110501854 LOC106582380 coding upstream 334541 38899484 ~ 38929741 (-)
LOC118943608 NA coding upstream 346521 38911464 ~ 38913545 (-)
LOC118943609 NA coding upstream 413564 38975839 ~ 38989602 (-)
klf7b klf7 coding upstream 433739 38998682 ~ 39154770 (-)
G1807917 NA non-coding downstream 3828 38559942 ~ 38560352 (-)
G1807893 NA non-coding downstream 59949 38503858 ~ 38504231 (-)
G1807805 NA non-coding downstream 251519 38312255 ~ 38312661 (-)
G1807785 NA non-coding downstream 263986 38299184 ~ 38300194 (-)
G1807731 NA non-coding downstream 322907 38208790 ~ 38241273 (-)
G1807922 NA non-coding upstream 16141 38581084 ~ 38597380 (-)
G1807923 NA non-coding upstream 16892 38581835 ~ 38582313 (-)
G1807942 NA non-coding upstream 78070 38643013 ~ 38643294 (-)
G1807959 NA non-coding upstream 123037 38687980 ~ 38688208 (-)
G1807965 NA non-coding upstream 134153 38699096 ~ 38699359 (-)
G1807750 LOC106582372 other downstream 369084 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 803932 37759971 ~ 37760248 (-)
G1806449 NA other downstream 1451706 37043561 ~ 37112474 (-)
G1806393 NA other downstream 1628093 36935658 ~ 36936087 (-)
LOC110502145 LOC106586333 other upstream 10923 38520872 ~ 38726596 (-)
G1808299 NA other upstream 379193 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 2171705 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 2882956 41447899 ~ 41523764 (-)
G1811042 NA other upstream 3040031 41604974 ~ 41605231 (-)

Expression


Co-expression Network