G1808352


Basic Information

Item Value
gene id G1808352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 39071813 ~ 39074774 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2068979
GAGAAGTGTGATGTTGTCTTGATGTTCCTGGTTGAATACTTGTGAATTCACCACCTGCACCATTTCCTTTGATAATCAGATCCTTGTTGGAATATTTCATATAGGAATGCTGTTTGACCATTCATccttcccttctcccttcctTGGAGTAATCACTGATCTACCATGGTTGTGTAGGTGAACACGACGATTCCACTACTGTGCTTAGCCTGCACCACCCATTTCTGTCAAGTCAGATCAGTAGTAACTCTGAAGGAAGGAAAGGATAGAAGGAGGCCTTTTCAACGTATTAGAACAGAGCAAAAGACTCAGGAAGCCATTCAGTTAGCCATTCAGTTAGCCATTCAGTTAGCCATTCAGTTAGCCATTCAGTTAGCCATTTAATGGGAGAGTAGATGTTGTGGTAACTATGGAAGAGAAGAAGTAGGCATTGGTGGCGTCAGCGACATGGTATGAGGGGGGAGTTGTCGGATAGGGgagttgtcagacagaagagttgtcAGATAGGAGAGTTGTCAGGCAGAAGAGTTGTCAGataggagagttgtcagatagaagagttgtcagataggacagttgtcagacagaagagttgtcagataggagagttgtcagacagaagagttgtcGGATAGAagagttgtcagacagaagagttgtcagataggagagttgtcagacagaagagttgttggataggagagttgtcagataggagagttgtcagacaggagagttgtcagacagaagagttgtcagataggagagttgtcagacagaagagttgtcagataggagagttgtcagacagaagagttgtcggataggagagttgtcagacagaagagttgtcagataggagagttgtcagacagaagagttgtcggataggagagttgtcagacagaagagttgtcGGATAAGATAGTTGTCAGACAGAAGATTTGTCGGATAGAAGAGTTGTCAGATAGGAGAGTTGTAAGATAGGAGAGTTATCAGATAGGAGAGTTGTCAGACAGAAGAGTTATCGgataggagagttgtcagacagaagagttgtcggataggagagttgtcagacagaagagttgtcGGGTAGGAGAAttgtcagacagaagagttgtcggataggagagttgtcagacAGAAAAGTTGTCAGACAAGAGAGTTGTCagataggagagttgtcagacagaagagttgtcAGATAGGAGAGTTGTTGGACAGGAGAGTTGTCagataggagagttgtcagacagaagagttgtcagacagaagagttATCGGATAGGAGAGTTGTCGGACAGAAGTGTTGTCATACAGGAGAGTTGTCagataggagagttgtcagatagaagagttgtcagataggagagttgtcagacagaagagttgtcagataggagagttgtcagacagaagagttgtcagataggggagttgtcagacagaagagttgtcAGATAGGATAGTTGTTAGACTGAAGAGTTGTCagataggagagttgtcagaaagaagagttgtcagataggagagttgtcagataggagagttgtcagacagaagagttgtcggataggagagttgtcagacagaagagttgtcGGATAGGAGTCTTGTCAGACAAAAGAGTTATCGGATAGGTgagttgtcagacagaagagttgtcagacagaagagttgtcagataggagagttgtcagacagaagagttgtcAGATAGGAGAGTTGTTGGACAGGAGAGTTGTCagatagg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106606497 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2068979 True 1756 lncRNA 0.44 4 39071813 39074774

Neighbor

gene id symbol gene type direction distance location
LOC118943609 NA coding downstream 91787 38975839 ~ 38989602 (-)
LOC110501854 LOC106582380 coding downstream 142072 38899484 ~ 38929741 (-)
LOC118943608 NA coding downstream 158268 38911464 ~ 38913545 (-)
ccnyl1 LOC106582379 coding downstream 179072 38874414 ~ 38892741 (-)
LOC110502145 LOC106586333 coding downstream 345217 38520872 ~ 38726596 (-)
LOC110502146 LOC106582388 coding upstream 354898 39429672 ~ 39436466 (-)
LOC118943588 NA coding upstream 362425 39437199 ~ 39441516 (-)
ramp1 LOC106582391 coding upstream 515255 39590029 ~ 39680169 (-)
LOC110501861 LOC106582392 coding upstream 608446 39683220 ~ 39731114 (-)
LOC110502147 LOC106582393 coding upstream 661655 39736429 ~ 39847997 (-)
G1808343 NA non-coding downstream 12377 39059103 ~ 39059436 (-)
G1808302 NA non-coding downstream 119255 38952230 ~ 38952558 (-)
G1808297 NA non-coding downstream 130603 38940992 ~ 38941210 (-)
G1808284 NA non-coding downstream 154661 38915248 ~ 38917152 (-)
G1808353 NA non-coding upstream 7050 39081824 ~ 39086829 (-)
G1808362 NA non-coding upstream 17973 39092747 ~ 39094577 (-)
G1808367 NA non-coding upstream 33565 39108339 ~ 39123554 (-)
G1808385 NA non-coding upstream 91646 39166420 ~ 39229856 (-)
G1808451 NA non-coding upstream 235483 39310257 ~ 39310489 (-)
G1808299 NA other downstream 127283 38944136 ~ 38944530 (-)
G1807731 NA other downstream 858626 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 876717 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 1311565 37759971 ~ 37760248 (-)
LOC110501878 LOC106582406 other upstream 1661874 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 2373125 41447899 ~ 41523764 (-)
G1811042 NA other upstream 2530200 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 3312048 42386822 ~ 42389273 (-)
LOC110502155 psd12 other upstream 3529929 42603998 ~ 42605768 (-)

Expression


Co-expression Network