Gene
RNA
| Item | Value |
|---|---|
| gene id | G1809296 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 40010723 ~ 40011196 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2070038 | True | 474 | lncRNA | 0.47 | 1 | 40010723 | 40011196 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem177 | tm177 | coding | downstream | 157354 | 39850855 ~ 39853369 (-) |
| LOC110502147 | LOC106582393 | coding | downstream | 162726 | 39736429 ~ 39847997 (-) |
| LOC110501861 | LOC106582392 | coding | downstream | 279609 | 39683220 ~ 39731114 (-) |
| ramp1 | LOC106582391 | coding | downstream | 330554 | 39590029 ~ 39680169 (-) |
| LOC118943588 | NA | coding | downstream | 569207 | 39437199 ~ 39441516 (-) |
| LOC110501866 | LOC106582396 | coding | upstream | 73261 | 40084457 ~ 40170141 (-) |
| LOC118943637 | NA | coding | upstream | 272209 | 40283405 ~ 40284842 (-) |
| LOC110501872 | LOC106582401 | coding | upstream | 440401 | 40451597 ~ 40494774 (-) |
| LOC110501875 | LOC106582404 | coding | upstream | 664107 | 40675303 ~ 40684544 (-) |
| LOC110501878 | LOC106582406 | coding | upstream | 764012 | 40736648 ~ 40813437 (-) |
| G1809115 | NA | non-coding | downstream | 80915 | 39929515 ~ 39929808 (-) |
| G1809109 | NA | non-coding | downstream | 83559 | 39924687 ~ 39927164 (-) |
| G1809065 | NA | non-coding | downstream | 133443 | 39876951 ~ 39877280 (-) |
| G1809034 | NA | non-coding | downstream | 200723 | 39809321 ~ 39810000 (-) |
| G1809012 | NA | non-coding | downstream | 239911 | 39770447 ~ 39770812 (-) |
| G1809297 | NA | non-coding | upstream | 1565 | 40012761 ~ 40012999 (-) |
| G1809304 | NA | non-coding | upstream | 14452 | 40025648 ~ 40025879 (-) |
| G1809307 | NA | non-coding | upstream | 19936 | 40031132 ~ 40031391 (-) |
| G1809313 | NA | non-coding | upstream | 26342 | 40037538 ~ 40037780 (-) |
| G1809337 | NA | non-coding | upstream | 69098 | 40080294 ~ 40083992 (-) |
| G1808299 | NA | other | downstream | 1066193 | 38944136 ~ 38944530 (-) |
| LOC110502145 | LOC106586333 | other | downstream | 1398436 | 38520872 ~ 38726596 (-) |
| G1807731 | NA | other | downstream | 1797536 | 38208790 ~ 38241273 (-) |
| G1807750 | LOC106582372 | other | downstream | 1815627 | 38193422 ~ 38195096 (-) |
| G1807020 | LOC105030512 | other | downstream | 2250475 | 37759971 ~ 37760248 (-) |
| LOC110501886 | rhg15 | other | upstream | 1436703 | 41447899 ~ 41523764 (-) |
| G1811042 | NA | other | upstream | 1593778 | 41604974 ~ 41605231 (-) |
| G1812079 | LOC106582433 | other | upstream | 2375626 | 42386822 ~ 42389273 (-) |
| LOC110502155 | psd12 | other | upstream | 2593507 | 42603998 ~ 42605768 (-) |
