XLOC_037241 (si:ch211-168k14.2)


Basic Information

Item Value
gene id XLOC_037241
gene name si:ch211-168k14.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 31556043 ~ 31586956 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073290
AGACCAGTTCCCTTAGAAGTTACATTGGCAGTACTGAACTCTGCGGAGAGACTCGCTTCTGGCACGGCAAAGACTACTGCAACTTCATCCTCAAAGACTGGGTCAAACTCAACAAGCCTTTTGATGATTTTATTGACAGGTATAAAACGCCACGGATGCCCTGGCATGATATTGGTGTGATGGTTCATGGAAAGGCTGCGAGAGATATTGCACGACATTTCATTCAGAGGTGGAATTTTACAAAGCTGGTGAAGAAGCGGTCGGGGGCGACGTGTTACCCCTGCCTCATGCCCAAGTCTCTCTGTGCACCCATGATGCCAGCTGAGTACACCGACAGATCCACACAGGCTAACGTTCAGGTTTTACGGTCTGTGTGCCAGTGGTCTACTGGGTCAAAGGTTCATGAGGAGTCCATTCATTTAGCCTATGTATCGGCCATCCAGAACAGTAAACACTTTATCTACATAGAGAATCAGTTCTTCATCAGTTGTGCCGACAAAACCATCCACAACAGCATTGGCGATGCTCTAACTGAGAGGATCCTGCGGGCGTACAGGGAGAAGAAGAGATTTCGGGTATATGTGGTGATGCCCCTGCTGCCCGGCTTTGAAGGTGACATCTCTTCAGGAGGAGGCCAAGCCATCAAAGCAATCATGCACTTTAATTACAGGACAATGTGTCGAGGGGAGCACTCCATTATTGAGAGGCTCAAATGTGTGATGTCAGATTGCTGGATCAAGTACATCTCATTCTGTGGTCTGCGGACTCATGCTGATCTGGATGGCCGTCTGGTCACTGAACTCATTTACGTGCACAGCAAGCTCATGATCGTGGACGACTGCACTGTCATTATTGGCTCCGCCAACATCAATGACAGGAGCATGCTGGGAAAGAGAGACAGTGAGATGGCTGTGGTTGTGGAGGACACTGAGCTGCAGTCGTCTGTCATGGATGGAGAGAGTTTTCAGGCTGGCAGATTTGCTCGGTCTCTGCGCAAAGAGTGCTTCAGACTTGTTCTTGGCTTGCCGGAAGACAATACAGACATCAGCGATCCCGTCAGTGACCGATTCTACAAGGAAATCTGGATGGTGACCGCAGCCAGAAACGCCAGTGTGTATGACAAGGTCTTCAGATGTCTGCCGACTGACGCAGTGCTGAACTATAAGATCCTGAGGGAGTACACGTGTCGTCCTTGCATGGCGACTGAAGACCCGGCACAGGCCTGCTCTGAACTCAAGAAGATAAGAGGTTTTCTGGTCCAGTTTCCCTTGCATTTCCTTTCTGAGGAGAACCTTTTCCCTTCCTTCAACTCTAAAGAGGGTATGATGCCCATCGAGCTGTGGACGTAGAATCTCTCAACCCTTTAATGGCTGTTCTCTCTTTTTAAGCATGTCATCTAATGACGCTTTATGTGCTGTCAGCAGCATTCATACTTCTGTAGagcccaggcccggattggctaatcgggaggaccgggagaattcccggtgggccggtctgttttttggccgcgagggccggtgtccctagctccagaatctgttgctctcagcaatcacactttttaaatttatttatttacttgaccacagcctttttattcattattataccgcaactcttctcttttgatctattttaatgatgataaaactcagttgtgtcatCATTCATAAAACAGTTGTTGTGGTCGAGCG
>TCONS_00073291
GTTGATGGTCAGCCCAACAGGCTATCTGGATGTGGCACAGTAATTAGCGCTCTTTAGGGGTGTGATTTTGGAGTCAGCGTCGGGCGTTCTGTCTGATCCCAATCAACTCTCCTTTTATTTGCTAGCTGGTGAAGAAGCGGTCGGGGGCGACGTGTTACCCCTGCCTCATGCCCAAGTCTCTCTGTGCACCCATGATGCCAGCTGAGTACACCGACAGATCCACACAGGCTAACGTTCAGGTTTTACGGTCTGTGTGCCAGTGGTCTACTGGGTCAAAGGTTCATGAGGAGTCCATTCATTTAGCCTATGTATCGGCCATCCAGAACAGTAAACACTTTATCTACATAGAGAATCAGTTCTTCATCAGTTGTGCCGACAAAACCATCCACAACAGCATTGGCGATGCTCTAACTGAGAGGATCCTGCGGGCGTACAGGGAGAAGAAGAGATTTCGGGTATATGTGGTGATGCCCCTGCTGCCCGGCTTTGAAGGTGACATCTCTTCAGGAGGAGGCCAAGCCATCAAAGCAATCATGCACTTTAATTACAGGACAATGTGTCGAGGGGAGCACTCCATTATTGAGAGGCTCAAATGTGTGATGTCAGATTGCTGGATCAAGTACATCTCATTCTGTGGTCTGCGGACTCATGCTGATCTGGATGGCCGTCTGGTCACTGAACTCATTTACGTGCACAGCAAGCTCATGATCGTGGACGACTGCACTGTCATTATTG

Function

symbol description
si:ch211-168k14.2 Predicted to enable N-acylphosphatidylethanolamine-specific phospholipase D activity; phosphatidylinositol binding activity; and phospholipase D activity. Predicted to act upstream of or within inositol lipid-mediated signaling; lipid catabolic process; and phosphatidic acid biosynthetic process.

GO:

id name namespace
GO:0006654 phosphatidic acid biosynthetic process biological_process
GO:0048017 inositol lipid-mediated signaling biological_process
GO:0035091 phosphatidylinositol binding molecular_function
GO:0004630 phospholipase D activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-149 Predicted to enable N-acylphosphatidylethanolamine-specific phospholipase D activity; phosphatidylinositol binding activity; and phospholipase D activity. Predicted to act upstream of or within inositol lipid-mediated signaling; lipid catabolic process; and phosphatidic acid biosynthetic process.

Ensembl:

ensembl_id ENSDARG00000056191

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073290 False 1697 mRNA 0.48 11 31556043 31586956
TCONS_00073291 True 735 processed_transcript 0.50 6 31566399 31572679

Neighbor

gene id symbol gene type direction distance location
XLOC_037240 si:ch211-168k14.2 coding upstream 6480 31534601 ~ 31549563 (+)
XLOC_037239 BX571700.1 coding upstream 60278 31495648 ~ 31495765 (+)
XLOC_037238 NA coding upstream 127309 31347037 ~ 31428734 (+)
XLOC_037237 NA coding upstream 213434 31280401 ~ 31342609 (+)
XLOC_037236 NA coding upstream 286900 31264874 ~ 31269143 (+)
XLOC_037242 itgbl1 coding downstream 165672 31752628 ~ 31833565 (+)
XLOC_037243 NA coding downstream 326540 31913496 ~ 31914462 (+)
XLOC_037244 BX470263.1 coding downstream 406355 31993311 ~ 31993433 (+)
XLOC_037245 si:dkey-83m22.7 coding downstream 483001 32069957 ~ 32071430 (+)
XLOC_037246 pikfyve coding downstream 486650 32073606 ~ 32106034 (+)
XLOC_037232 BX571809.3 non-coding upstream 839137 30695283 ~ 30716906 (+)
XLOC_037248 BX530407.4 non-coding downstream 602183 32189139 ~ 32192519 (+)
XLOC_037249 NA non-coding downstream 636739 32223695 ~ 32238109 (+)
XLOC_037252 NA non-coding downstream 757927 32344883 ~ 32349025 (+)

Expression


Co-expression Network