XLOC_037249


Basic Information

Item Value
gene id XLOC_037249
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 32223695 ~ 32238109 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074917
TCTCTAACAATCACAGATATTgcttattattaattaaagattgctaaatattaattgacatttatttttgtttaaatgtctgAAAGTGTTTTAAACATGAACCCCAATGTGAAGTAAACCCTGTGAATTGCTGTTTGCAACTTGCATTTAGTTTGGTGTGGTTATGGCTTGTGTTTTCAGAGGTAAATATTACTTCACGCGGGTGGAGGTGAACAATGCTGTTGTCTCATAAATGACAGTAGTCTGTGGTTTAGATCTAGGCTATTGAAAAAGTCACAGAAACCAAAGCCACGTTTCATTCATAGCAGAACAGCAcagctttatttaaaattgaCAGAGGTGTTAACGAGATCAGATCTTATTCCACAAAAAAGGTGGACCTGAAGACACATGACAAATGACTTCTAGCTGTGTGACACCTTATCATGATACCTAATTCATTCCCTAAATGACCATATAAATGTATTGGTAACCCATTAAATTACTGACTAAAATCAATCTGAAATAAAATTCTTTTTAATACACATCAACAAACAGCATtcataaaacaaaactgaaacgACTCCTCTGTTTACTAGCACGCTCCGCAAGTTATTCTCACAGCTTATTGCCCGTATACCTCGGGATCGTCTCAAAACCGCTACTTTTAAGATGGTCAGCCGACCTCAATCAAGCCCAAAACAAAGAACACGGAAAAAACGGAGTAGGCACTTctgttttttttttccactttttcagGGGCTTTGTGGGCAAAAATCTGCATTCCCACAATATTTGCCATCCCAGTGCTCAATCATTCACTTTGTTGATTAGTGGGTGCTTGaatattttttgttgctttttaataACACATATTGAGACTGGTGTTGTGTGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074917 True 874 lncRNA 0.36 2 32223695 32238109

Neighbor

gene id symbol gene type direction distance location
XLOC_037248 BX530407.4 coding upstream 31176 32189139 ~ 32192519 (+)
XLOC_037247 coq10b coding upstream 35250 32178050 ~ 32188445 (+)
XLOC_037246 pikfyve coding upstream 117661 32073606 ~ 32106034 (+)
XLOC_037245 si:dkey-83m22.7 coding upstream 152265 32069957 ~ 32071430 (+)
XLOC_037244 BX470263.1 coding upstream 230262 31993311 ~ 31993433 (+)
XLOC_037250 hspe1 coding downstream 62908 32301017 ~ 32305007 (+)
XLOC_037251 mob4 coding downstream 68753 32306862 ~ 32312862 (+)
XLOC_037252 NA coding downstream 106774 32344883 ~ 32349025 (+)
XLOC_037253 plcl1 coding downstream 120405 32358514 ~ 32457334 (+)
XLOC_037254 NA coding downstream 298637 32536746 ~ 32537384 (+)
XLOC_037243 NA non-coding upstream 309233 31913496 ~ 31914462 (+)
XLOC_037239 BX571700.1 non-coding upstream 727930 31495648 ~ 31495765 (+)
XLOC_037238 NA non-coding upstream 794961 31347037 ~ 31428734 (+)
XLOC_037257 NA non-coding downstream 653788 32891897 ~ 32895100 (+)
XLOC_037261 BX511259.1 non-coding downstream 836571 33074680 ~ 33082181 (+)
XLOC_037270 BX545856.2 non-coding downstream 1006089 33244198 ~ 33245755 (+)

Expression


Co-expression Network