XLOC_037252


Basic Information

Item Value
gene id XLOC_037252
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 32344883 ~ 32349025 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075155
GTATGTCGATCATGCGGAAGCTGCATGTGTGAGTATGTCATCAAGGGTGTACAGGCTGCCCACCagatcaatgcggagactcgtctgtcactggggtttGCTCTCCACTCATCCATGagcaccacagcatctgctcaagatacggcctggtccaagattatggAAACCTCTCTTGAAGACCTCTGTTATACACATCCTTCTGTCCACGAGATGAGAAGGCAGAGCTTGTTATATACTCACCAGTGACTAAACCCTTTATTTAACTTaacaaatagtgttttcaaaagaaaagtGAGTAAAGTGCACTGTGATGTTGTTTTACCTTGATTTAACATTGCTTTTATCTAGTTTGCGGATCCATGATTTATTGGACTTGAGTCAAGTACAAAACCATTACTAGACCAAAACAGGGATTACAAACCTATTCCACTTATAGACACTTAAGGTGTTTTGTTGATCTTATTTTGTGCAAAGGACTGTACGAAAATAATCATTAAGTCATCAGTAATATGGCCCTGTGAATATCACAATTGttaaaggaacaaaagttgttggtgTCATACGGCATTCATTTTACCAGTGCAGTCAAATttaatgtgtttaacaaaaatgtagactgaagcacatatttccaataagTTGCAAAATTTGGATAGTTTTTGGCAATCACAACATCCACTTTTTATGTATCATGCCAGCCTCAGAATCACCAGCCTGACCGCATGTGCCTGTAAGTCAGTGCTCTGAAATAAACCAAGTCTGGGTCTTAGACCGGAAACCACTGTCATTCTGAGACCACACCCAGAGGACACTGGAAAGGAAACCCATGCCTTCTTTAAACACAGCGGAGGAAGGAAACAAACATACAGTCTGCTGTTAAACCACTGCAAACTCTTAATGCAATGAAGCCCCtgcaaacataaaacacacattggttatttaattaatctggtgataatgtttagtttcatttctCATCTGTCTTCATATTTTGATggcaaaatgaataattaaatcttTATCTGTAATCCTGTTCATCTAATCCTGAGTTTAAATCTCATGTGCATCAAGGGTAACTTGCAATAATCATTTCAACATTAGGCTGGCACTAACAAGTTCGTACTGaatgaatgtaatgtttttttttttttaattattattttaattagctgcttatttgATTTTAATGATGGCTTAGCAAAAACTTATAGAGGTATCTCAGcctaaaatgacaatttactcacaTTATGAATAATGTGAATacaaacaagatattctgaagaatgctagAGGAAAAAGCAGCCATCGACATTCCAATTCTAGAAGACAATAGCAGTTTTTTTCCCCAGCATTTTatatcttgttttatgttcagagaaagagttttgaaaaaaga

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075155 True 1396 lncRNA 0.37 2 32344883 32349025

Neighbor

gene id symbol gene type direction distance location
XLOC_037251 mob4 coding upstream 32021 32306862 ~ 32312862 (+)
XLOC_037250 hspe1 coding upstream 39876 32301017 ~ 32305007 (+)
XLOC_037249 NA coding upstream 106774 32223695 ~ 32238109 (+)
XLOC_037248 BX530407.4 coding upstream 152364 32189139 ~ 32192519 (+)
XLOC_037247 coq10b coding upstream 156438 32178050 ~ 32188445 (+)
XLOC_037253 plcl1 coding downstream 9489 32358514 ~ 32457334 (+)
XLOC_037254 NA coding downstream 187721 32536746 ~ 32537384 (+)
XLOC_037255 rabl3 coding downstream 286521 32635546 ~ 32670526 (+)
XLOC_037256 ankrd50l coding downstream 510942 32859967 ~ 32875568 (+)
XLOC_037257 NA coding downstream 542872 32891897 ~ 32895100 (+)
XLOC_037244 BX470263.1 non-coding upstream 351450 31993311 ~ 31993433 (+)
XLOC_037243 NA non-coding upstream 430421 31913496 ~ 31914462 (+)
XLOC_037239 BX571700.1 non-coding upstream 849118 31495648 ~ 31495765 (+)
XLOC_037261 BX511259.1 non-coding downstream 725655 33074680 ~ 33082181 (+)
XLOC_037270 BX545856.2 non-coding downstream 895173 33244198 ~ 33245755 (+)
XLOC_037276 NA non-coding downstream 1377658 33726683 ~ 33764177 (+)

Expression


Co-expression Network