XLOC_037267 (si:ch211-125e6.13)


Basic Information

Item Value
gene id XLOC_037267
gene name si:ch211-125e6.13
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 33220342 ~ 33221670 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073346
CTTAAATCTGGTCTGACCTTACTTCAGGTTTCTCTAGTTATTTGGATTCCCAATGTCTGTATCTGTGATATATAATTTATTccatgtttattgttattttgtttaattttttatagtGCTTGTGCTCCATTTCTGGATGCAGGGCTGACTGAGTAGTTTCACAAACTCCTCAAACCTCACTGAAGACCTCTGTCTGAACACCAAAGTTCATGATGGTGATGCTGAGAAGTCTTCTGCTGTTTTTCTTGTTCTGCATGGGCATTGCAGCAGAAAGGAGATGCCCACGTCAATGGAGAAGGTCTGGATCTCGATGCTTTAGGCTTTTCTCTACATCAGTGAACTGGGCCACAGCAGAGAAAAACTGTCAACGTCTTGGTGGGAATCTTGCCTCTGTGCTAAACGATGTGGAAAATGATTTTCTGCTGAGTCTGATACCCAACTCCAAACGTTTCTTTATTGGTGGCTATAATGTTGATGAACAGAACTGGTTTTGGTCTGATGGATCTCCATTTGGTTATACAAACTGGTGCTCAGGAGAGCCTAACAACATGAATACGGAGCACTGCTTGGAGATTAACTGGACCGCAAACCGTTGTTGGAACAACTTGCCTTGTTCAGTTGAACTAGGCTATATCTGTGCCAAGAACCTAAATGATTGCTCTTAATTTAAGTGTTCATCTTGTTCAATCACAAGGCTAAATATGCCAATTAAGATACTGTTCTCATCACCTGCTTGAATCAATAAATCAAAGCAAATCATTGGTGTTTAA
>TCONS_00073347
ATCTGGTCTGACCTTACTTCAGtGCTTGTGCTCCATTTCTGGATGCAGGGCTGACTGAGTAGTTTCACAAACTCCTCAAACCTCACTGAAGACCTCTGTCTGAACACCAAAGTTCATGATGGTGATGCTGAGAAGTCTTCTGCTGTTTTTCTTGTTCTGCATGGGCATTGCAGCAGAAAGGAGATGCCCACGTCAATGGAGAAGGTCTGGATCTCGATGCTTTAGGCTTTTCTCTACATCAGTGAACTGGGCCACAGCAGAGAAAAACTGTCAACGTCTTGGTGGGAATCTTGCCTCTGTGCTAAACGATGTGGAAAATGATTTTCTGCTGAGTCTGATACCCAACTCCAAACGTTTCTTTATTGGTGGCTATAATGTTGATGAACAGAACTGGTTTTGGTCTGATGGATCTCCATTTGGTTATACAAACTGGTGCTCAGGAGAGCCTAACAACATGAATACGGAGCACTGCTTGGAGATTAACTGGACCGCAAACCGTTGTTGGAACAACTTGCCTTGTTCAGTTGAACTAGGCTATATCTGTGCCAAGAACCTAAATGATTGCTCTTAATTTAAGTGTTCATCTTGTTCAATCACAAGGCTAAATATGCCAATTAAGATACTGTTCTCATCACCTGCTTGAATCAATAAATCAAAGCAAATCA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-37 No description available

Ensembl:

ensembl_id ENSDARG00000094370

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073346 False 770 mRNA 0.40 6 33220342 33221670
TCONS_00073347 True 665 mRNA 0.43 7 33220347 33221659

Neighbor

gene id symbol gene type direction distance location
XLOC_037266 si:ch211-125e6.12 coding upstream 2073 33216945 ~ 33218269 (+)
XLOC_037265 si:ch211-125e6.11 coding upstream 10683 33207574 ~ 33209659 (+)
XLOC_037264 dop1b coding upstream 24756 33174064 ~ 33195586 (+)
XLOC_037263 dop1b coding upstream 51127 33154841 ~ 33169215 (+)
XLOC_037262 atp5po coding upstream 71469 33145522 ~ 33148873 (+)
XLOC_037268 si:ch211-125e6.14 coding downstream 1241 33222911 ~ 33223829 (+)
XLOC_037269 lectin coding downstream 15174 33236844 ~ 33238249 (+)
XLOC_037270 BX545856.2 coding downstream 22528 33244198 ~ 33245755 (+)
XLOC_037271 usp9 coding downstream 39660 33261330 ~ 33321040 (+)
XLOC_037272 ddx3xa coding downstream 112831 33334501 ~ 33354738 (+)
XLOC_037261 BX511259.1 non-coding upstream 138161 33074680 ~ 33082181 (+)
XLOC_037257 NA non-coding upstream 325242 32891897 ~ 32895100 (+)
XLOC_037254 NA non-coding upstream 682958 32536746 ~ 32537384 (+)
XLOC_037252 NA non-coding upstream 871317 32344883 ~ 32349025 (+)
XLOC_037249 NA non-coding upstream 982233 32223695 ~ 32238109 (+)
XLOC_037276 NA non-coding downstream 505013 33726683 ~ 33764177 (+)
XLOC_037279 NA non-coding downstream 775472 33997142 ~ 34008566 (+)
XLOC_037285 NA non-coding downstream 1065084 34286754 ~ 34296124 (+)
XLOC_037287 NA non-coding downstream 1149190 34370860 ~ 34378332 (+)

Expression


Co-expression Network