G1813904


Basic Information

Item Value
gene id G1813904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43424697 ~ 43426993 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2075147
GTTTAGgaaaagggttatggttaggctACAGTTGTCAATAGCTGTTGTCCCCCGACTCTCTATTTACAAGCACAAattgatgctggcactaagaccacaatTGACGAGCtctatagggccataagcaaacaagaacatGCACATCCCCAGGCAGCTCTTCTCGTGGCCGGGGATTTTTCATGCAGGGAAATTGGAATCTGTTAACTTCATTTaataccagcatgtcacctgtgcaactagaggcgaaaaaactctagatcatctttactctacacacagaaatgcatacaaggctctccttcaccttttctttttcaaatctgaccataactttatcctcctgtttacaaacaaaaactcaaacaggaagtaccagtgactcaatGTGGAAGGGGTCCggtgaagcggatgctaagctacaggactgcgTATACCTCCaatacattgatctggtactggtactccctgtagttatagctctacattgatctggtactggtactccctgtatatagctctacattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagcttcatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccatattgatctggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagcctccacattgatctggtactggtactccctgtatatagctccacattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccacattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagccccacattgatctggtactggtactccctgtatatagccccatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagccccacattgatctggtactggtactccctgtatatagccccacattgatctggtactggtactccctgtatatagccccacattgatctggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagctccatattgatctggtactggtactccctgtatatagccccacattgatctggtactggtacttacTGTTCTGTATGTATCTTCAAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106612170, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2075147 True 1504 lncRNA 0.43 2 43424697 43426993

Neighbor

gene id symbol gene type direction distance location
LOC110502159 NA coding downstream 265036 43153787 ~ 43159661 (-)
LOC110501903 LOC106582442 coding downstream 323048 43099332 ~ 43101649 (-)
LOC110502158 LOC100137092 coding downstream 357562 43059549 ~ 43067135 (-)
LOC110501902 LOC106582441 coding downstream 368223 43050404 ~ 43056474 (-)
LOC110501899 LOC106582439 coding downstream 601085 42801020 ~ 42823612 (-)
LOC118943590 NA coding upstream 66292 43493285 ~ 43498392 (-)
LOC110502160 LOC106576908 coding upstream 158966 43585959 ~ 43587743 (-)
LOC110502161 LOC106582431 coding upstream 184556 43611549 ~ 43612567 (-)
LOC118943640 LOC106582482 coding upstream 240910 43667903 ~ 43669453 (-)
LOC118943591 LOC106582431 coding upstream 253676 43680669 ~ 43681964 (-)
G1813898 NA non-coding downstream 11573 43412916 ~ 43413124 (-)
G1813897 NA non-coding downstream 12477 43411914 ~ 43412220 (-)
G1813892 NA non-coding downstream 16801 43407673 ~ 43407896 (-)
G1813891 NA non-coding downstream 18789 43405402 ~ 43405908 (-)
G1812976 NA non-coding downstream 252916 43171568 ~ 43171781 (-)
G1813905 NA non-coding upstream 1134 43428127 ~ 43486337 (-)
G1813950 NA non-coding upstream 70797 43497790 ~ 43498288 (-)
G1813953 NA non-coding upstream 74825 43501818 ~ 43502253 (-)
G1813954 NA non-coding upstream 75308 43502301 ~ 43502577 (-)
G1813956 NA non-coding upstream 77654 43504647 ~ 43504901 (-)
G1812404 NA other downstream 746937 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 819677 42603998 ~ 42605768 (-)
G1812079 LOC106582433 other downstream 1035424 42386822 ~ 42389273 (-)
G1811042 NA other downstream 1819466 41604974 ~ 41605231 (-)
LOC110501886 rhg15 other downstream 1959050 41447899 ~ 41523764 (-)
LOC110502171 LOC106582464 other upstream 1083414 44473683 ~ 44553607 (-)
G1814480 NA other upstream 1246454 44673447 ~ 44673888 (-)
G1815615 LOC106582489 other upstream 2411757 45838750 ~ 45840982 (-)
G1816841 NA other upstream 3798558 47225551 ~ 47226646 (-)
G1816929 NA other upstream 3974129 47400985 ~ 47402047 (-)

Expression


Co-expression Network