XLOC_037274 (gpr34b)


Basic Information

Item Value
gene id XLOC_037274
gene name gpr34b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 33417969 ~ 33419321 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073357
AATTCACAAGGTAAGGCAGAAGCTAACGTGCATTagacatttaattacatttcaagTCAAAAAGAACCTCAATGCTTTGGCTAGTAATAATGATATCTGCTTCTCTTTCTAAGGTTTGATATACATACACGCAAAGATGAACAACTATTCTCAAAACTACCATAATGAGTCACTGACCAGACGGCAGGAACCTCAGAACTGCTACATGGACAATACCAGCTTACGGATCCCATTGGCAGTTTTCTACACACTCTTCTTTCTGTTTGGGTTTGCTGGGAATCTGCTGGCTCTCTGGGTGTTTTTGCGACTACATCCAAAGAAAAACTCTGTTCGGATTTTCCTCATCAACTTGGCTCTAGCTGACATACTTCTTGTGATCTGCCTGCCTTTTCGAGTGGCGTACCATTTCAACAATAACCAATGGGTGCTGCCCTCACTGCTGTGCAGGATAGTGGGTAATGTCTTTTACATGAACATGTACATTAGTATAGCGTTACTGGGCTTCATTAGTGTAGACCGCTACTTGAAGTTCCACAGGGCATCGAGCAGGCGGTGGTTTCTGCAGAGTCACTGGAGTGCAATTGTTTGTGGTGTCCTCTGGGCTGTGTCAATTGCTGGAGTTTCACCATTTATTGTCAAGACGGAGAACAATAATGAAACTCATCAATGCTTCCAGTACAAAAAACTGTGTGATTCCAAATGGAAAGCCTATTTTAACTTTGTCATTGTGGCTATTTTTTGGGTGGTCTATGGTGCATTGGTAATGTCCTATGGAAGGATTGGAATGAAGCTCATTACAGCCTCCCGAGACAAACCAGATTTCCCAAACGCTGCAAAGTACAACAAAACTGCATGGAAGTCCTTCTTTGTGCTCTTCACCTTTACAGTGTGTTACGCACCCTACCACTTTGTCAGGATTTTCTATATTATGTCACAGATGGCACCTAATGTTTCTTGCAACAAGATGAATGTGTTGGATAAAACCAATGAAGTAGTTCTGCTACTGTCTGCCCTTAATAGCTGCCTGGATCCAGTCATGTACTTTTTGCTCTGCAGTTCTATTCGCAAAGTGACTCTGAAGTTTATCTGTAACTGCTTCTGTCAGCAAACCAACAACGCACTGAACAGCTCTAGTGACGAACAGCCGAAAATAATGACAGTTGTTCCCAAAACAATCTGTCAAGACATCAAAAAGgcaacaataataatcaaataataggTACAATGCAACCTTTCTTAAAATATTTGTACATACATGCCTTATGAACAATAAGCATATCGGTTGATGTCTTTGTACTATACATCTGAAACACTGCCTTTTCAATAAAGGTTACTTGAAGTTAAATATGAAAA

Function

symbol description
gpr34b Enables G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be integral component of plasma membrane. Orthologous to human GPR34 (G protein-coupled receptor 34).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0045028 G protein-coupled purinergic nucleotide receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040823-1 Enables G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be integral component of plasma membrane. Orthologous to human GPR34 (G protein-coupled receptor 34).

Ensembl:

ensembl_id ENSDARG00000002959

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073357 True 1353 mRNA 0.41 1 33417969 33419321

Neighbor

gene id symbol gene type direction distance location
XLOC_037273 nyx coding upstream 56770 33357011 ~ 33361199 (+)
XLOC_037272 ddx3xa coding upstream 63231 33334501 ~ 33354738 (+)
XLOC_037271 usp9 coding upstream 96929 33261330 ~ 33321040 (+)
XLOC_037270 BX545856.2 coding upstream 172214 33244198 ~ 33245755 (+)
XLOC_037269 lectin coding upstream 179720 33236844 ~ 33238249 (+)
XLOC_037275 si:dkey-216e24.9 coding downstream 3849 33423170 ~ 33427035 (+)
XLOC_037276 NA coding downstream 307362 33726683 ~ 33764177 (+)
XLOC_037277 BX572627.1 coding downstream 363740 33783061 ~ 33799756 (+)
XLOC_037278 kdm6a coding downstream 369068 33788389 ~ 33862124 (+)
XLOC_037279 NA coding downstream 577821 33997142 ~ 34008566 (+)
XLOC_037261 BX511259.1 non-coding upstream 335788 33074680 ~ 33082181 (+)
XLOC_037257 NA non-coding upstream 522869 32891897 ~ 32895100 (+)
XLOC_037254 NA non-coding upstream 880585 32536746 ~ 32537384 (+)
XLOC_037252 NA non-coding upstream 1068944 32344883 ~ 32349025 (+)
XLOC_037285 NA non-coding downstream 867433 34286754 ~ 34296124 (+)
XLOC_037287 NA non-coding downstream 951539 34370860 ~ 34378332 (+)
XLOC_037289 NA non-coding downstream 971130 34390451 ~ 34391153 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_02656782_02657768 NA coding CI01000009 null 2656557 ~ 2657823 (+)