XLOC_037275 (si:dkey-216e24.9)


Basic Information

Item Value
gene id XLOC_037275
gene name si:dkey-216e24.9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 33423170 ~ 33427035 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073358
AGAAAAGTGTTACAAACACGAGTACCGGACCACAAGGTGTGAAGAAATGTCTAATCAAGATGCTGCTCCAAATCATTTTTTAGGAGCCAATGATTCAGGCACCAATCAAAGCATCTGCAAAATACAACCTGAAGAAAGCCATGCAGCCATTTTGCCCTGGCTCTATCTCTCTTTGGCTCTCCTGGGCCTTCCAGCCAATGGACTGGTGTTGGTGAATCTCTGGAGATCAGAAAGGACGCCCACTGTCATCTTCACTCTCAACATAATCTTCTCAGACCTGCTGATGTGCTGCAGTTTTTTCTTCAGAACAGTTTACCACAGGAAGAACACTGAGTGGCTATCCGGAACTCCAGTTTGCAATGCAGTAGAGCTGATTATTTACTCTTGCTTCTACATTAACCTCTATTGCAACATGTGCTTTCTTTTATGGACCAGCATCAACCGTTATACAACGGTGGTAAAACCAAGCCACTCATTGTTTCAGGTGTTCAAACACACCCAGTCTTGTTGGATCCTTTGCTTTTCTACCTGGCTGGTGATCTTCATAGTCGTCGGCACGTGCATGGGCCTTAAACTGAGCTTACAAATCAACGGAAGTTGCTTTGACCAAGTTGGCAACAGTTATATTCGCTATCAAAATAAATTCCAAACTATCCACTGCTTAGGCGTGTCAACGTTCTTCTTCATTTTGTGTTTGATGTTGGTCAGCTACAGCCGGCTGATCTTCCATCTGCAGAAGGTGAGGGTAGGAAGTTTAGTCGGTGCTGGATTTGGACCTGGAGGAGGTCTAAAGGTTCGCAGGAAGATCTTGGCTTCAGTCATAATGTTTGTACTCTGCTTCTTGCCCTATCATGTGCAAAGGATCATTTTAATAACATCGCAGCATGAAAACTGCCAGGAAGAGTTCAGGATAAAAATGGGCACCATATTCATTGCAGCTCTCAGCTGTTGTCTGCATCCCCTCCTCCAGCTGGTTTTTCGTTTGCGCTGCTGTCGGGTCAATCGCAACACCAGGCCTAAACCCAAACCTGAAATCTCGAAAAGCTTGGACACACATCAGATGCATACTGTGCAGGTATCGGAAGACAAGAAAAATGAAGCTGAATTAAACCACCAACTAAAACCGCCTTGAGgaattaaagagaaaaaaaagtttgcaaCGATCACGCTTCCTGTTAAAAACTATCTGCAAGCTGTGAAACCCGCTAACCTCTGGGTTAGCAATGTGCCGTCACAATCATCAGTATGATTGTGGATAGAGGCAGAATTTGTGGCAAAGTTATATGATATACCaccatgcttttttttaaaagtggcaTCTAGTAGTTT

Function

symbol description
si:dkey-216e24.9 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-441 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000093418

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073358 True 1329 mRNA 0.44 2 33423170 33427035

Neighbor

gene id symbol gene type direction distance location
XLOC_037274 gpr34b coding upstream 3849 33417969 ~ 33419321 (+)
XLOC_037273 nyx coding upstream 61971 33357011 ~ 33361199 (+)
XLOC_037272 ddx3xa coding upstream 68432 33334501 ~ 33354738 (+)
XLOC_037271 usp9 coding upstream 102130 33261330 ~ 33321040 (+)
XLOC_037270 BX545856.2 coding upstream 177415 33244198 ~ 33245755 (+)
XLOC_037276 NA coding downstream 299648 33726683 ~ 33764177 (+)
XLOC_037277 BX572627.1 coding downstream 356026 33783061 ~ 33799756 (+)
XLOC_037278 kdm6a coding downstream 361354 33788389 ~ 33862124 (+)
XLOC_037279 NA coding downstream 570107 33997142 ~ 34008566 (+)
XLOC_037280 ccdc80 coding downstream 662121 34089156 ~ 34113209 (+)
XLOC_037261 BX511259.1 non-coding upstream 340989 33074680 ~ 33082181 (+)
XLOC_037257 NA non-coding upstream 528070 32891897 ~ 32895100 (+)
XLOC_037254 NA non-coding upstream 885786 32536746 ~ 32537384 (+)
XLOC_037252 NA non-coding upstream 1074145 32344883 ~ 32349025 (+)
XLOC_037285 NA non-coding downstream 859719 34286754 ~ 34296124 (+)
XLOC_037287 NA non-coding downstream 943825 34370860 ~ 34378332 (+)
XLOC_037289 NA non-coding downstream 963416 34390451 ~ 34391153 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_02667840_02668883 NA coding CI01000009 null 2667442 ~ 2669164 (+)