Gene
RNA
| Item | Value |
|---|---|
| gene id | G1814521 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 44744124 ~ 44745023 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2075867 | True | 240 | lncRNA | 0.35 | 2 | 44744124 | 44745023 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501923 | LOC106582471 | coding | downstream | 79261 | 44659569 ~ 44664863 (-) |
| LOC110502136 | NA | coding | downstream | 107792 | 44634884 ~ 44636332 (-) |
| LOC110501919 | LOC106582468 | coding | downstream | 111931 | 44598354 ~ 44632193 (-) |
| rbm45 | LOC106582466 | coding | downstream | 181649 | 44558131 ~ 44562475 (-) |
| LOC110502171 | LOC106582464 | coding | downstream | 190517 | 44473683 ~ 44553607 (-) |
| LOC110501924 | hoxd3ab | coding | upstream | 172456 | 44917479 ~ 44939556 (-) |
| LOC110501925 | hoxd4ab | coding | upstream | 183513 | 44928536 ~ 44933201 (-) |
| LOC110501927 | hoxd9ab | coding | upstream | 198189 | 44943212 ~ 44945287 (-) |
| LOC110501926 | hoxd10ab | coding | upstream | 202639 | 44947662 ~ 44950370 (-) |
| LOC110501928 | hoxd11ab | coding | upstream | 209277 | 44954300 ~ 44956065 (-) |
| G1814520 | NA | non-coding | downstream | 172 | 44742772 ~ 44743952 (-) |
| G1814514 | NA | non-coding | downstream | 3737 | 44740133 ~ 44740387 (-) |
| G1814509 | NA | non-coding | downstream | 9311 | 44734611 ~ 44734813 (-) |
| G1814508 | NA | non-coding | downstream | 11267 | 44732425 ~ 44732857 (-) |
| G1814497 | NA | non-coding | downstream | 31503 | 44712327 ~ 44712621 (-) |
| G1814527 | NA | non-coding | upstream | 3844 | 44748867 ~ 44749106 (-) |
| G1814534 | NA | non-coding | upstream | 10379 | 44755402 ~ 44755642 (-) |
| G1814537 | NA | non-coding | upstream | 10943 | 44755966 ~ 44756630 (-) |
| G1814541 | NA | non-coding | upstream | 16547 | 44761570 ~ 44761807 (-) |
| G1814545 | NA | non-coding | upstream | 19543 | 44764566 ~ 44764877 (-) |
| G1814480 | NA | other | downstream | 70236 | 44673447 ~ 44673888 (-) |
| G1812404 | NA | other | downstream | 2066364 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2139104 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2354851 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 1093727 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 2480528 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2656099 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2726271 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 3317026 | 48057851 ~ 48064453 (-) |
