Gene
RNA
| Item | Value |
|---|---|
| gene id | G1814652 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 44884355 ~ 44884649 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2076007 | True | 295 | lncRNA | 0.41 | 1 | 44884355 | 44884649 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501923 | LOC106582471 | coding | downstream | 219492 | 44659569 ~ 44664863 (-) |
| LOC110502136 | NA | coding | downstream | 248023 | 44634884 ~ 44636332 (-) |
| LOC110501919 | LOC106582468 | coding | downstream | 252162 | 44598354 ~ 44632193 (-) |
| rbm45 | LOC106582466 | coding | downstream | 321880 | 44558131 ~ 44562475 (-) |
| LOC110502171 | LOC106582464 | coding | downstream | 330748 | 44473683 ~ 44553607 (-) |
| LOC110501924 | hoxd3ab | coding | upstream | 32830 | 44917479 ~ 44939556 (-) |
| LOC110501925 | hoxd4ab | coding | upstream | 43887 | 44928536 ~ 44933201 (-) |
| LOC110501927 | hoxd9ab | coding | upstream | 58563 | 44943212 ~ 44945287 (-) |
| LOC110501926 | hoxd10ab | coding | upstream | 63013 | 44947662 ~ 44950370 (-) |
| LOC110501928 | hoxd11ab | coding | upstream | 69651 | 44954300 ~ 44956065 (-) |
| G1814650 | NA | non-coding | downstream | 205 | 44883859 ~ 44884150 (-) |
| G1814555 | NA | non-coding | downstream | 112579 | 44771526 ~ 44771776 (-) |
| G1814547 | NA | non-coding | downstream | 118042 | 44766111 ~ 44766313 (-) |
| G1814545 | NA | non-coding | downstream | 119478 | 44764566 ~ 44764877 (-) |
| G1814541 | NA | non-coding | downstream | 122548 | 44761570 ~ 44761807 (-) |
| G1814653 | NA | non-coding | upstream | 166 | 44884815 ~ 44885023 (-) |
| G1814665 | NA | non-coding | upstream | 10759 | 44895408 ~ 44895642 (-) |
| G1814669 | NA | non-coding | upstream | 13152 | 44897801 ~ 44898375 (-) |
| G1815143 | NA | non-coding | upstream | 30687 | 44915336 ~ 44915614 (-) |
| LOC110501930 | hoxd12ab | non-coding | upstream | 76898 | 44959757 ~ 44962879 (-) |
| G1814480 | NA | other | downstream | 210467 | 44673447 ~ 44673888 (-) |
| G1812404 | NA | other | downstream | 2206595 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2279335 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2495082 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 954101 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 2340902 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2516473 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2586645 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 3177400 | 48057851 ~ 48064453 (-) |
