Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815143 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 44915336 ~ 44915614 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2076580 | True | 279 | lncRNA | 0.38 | 1 | 44915336 | 44915614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501923 | LOC106582471 | coding | downstream | 250473 | 44659569 ~ 44664863 (-) |
| LOC110502136 | NA | coding | downstream | 279004 | 44634884 ~ 44636332 (-) |
| LOC110501919 | LOC106582468 | coding | downstream | 283143 | 44598354 ~ 44632193 (-) |
| rbm45 | LOC106582466 | coding | downstream | 352861 | 44558131 ~ 44562475 (-) |
| LOC110502171 | LOC106582464 | coding | downstream | 361729 | 44473683 ~ 44553607 (-) |
| LOC110501924 | hoxd3ab | coding | upstream | 1865 | 44917479 ~ 44939556 (-) |
| LOC110501925 | hoxd4ab | coding | upstream | 12922 | 44928536 ~ 44933201 (-) |
| LOC110501927 | hoxd9ab | coding | upstream | 27598 | 44943212 ~ 44945287 (-) |
| LOC110501926 | hoxd10ab | coding | upstream | 32048 | 44947662 ~ 44950370 (-) |
| LOC110501928 | hoxd11ab | coding | upstream | 38686 | 44954300 ~ 44956065 (-) |
| G1814669 | NA | non-coding | downstream | 16961 | 44897801 ~ 44898375 (-) |
| G1814665 | NA | non-coding | downstream | 19694 | 44895408 ~ 44895642 (-) |
| G1814653 | NA | non-coding | downstream | 30313 | 44884815 ~ 44885023 (-) |
| G1814652 | NA | non-coding | downstream | 30687 | 44884355 ~ 44884649 (-) |
| G1814650 | NA | non-coding | downstream | 31186 | 44883859 ~ 44884150 (-) |
| LOC110501930 | hoxd12ab | non-coding | upstream | 45933 | 44959757 ~ 44962879 (-) |
| G1815184 | NA | non-coding | upstream | 78363 | 44993977 ~ 44994624 (-) |
| G1815196 | NA | non-coding | upstream | 105684 | 45021298 ~ 45040004 (-) |
| G1815198 | NA | non-coding | upstream | 107910 | 45023524 ~ 45024465 (-) |
| G1815218 | NA | non-coding | upstream | 127715 | 45043329 ~ 45043619 (-) |
| G1814480 | NA | other | downstream | 241448 | 44673447 ~ 44673888 (-) |
| G1812404 | NA | other | downstream | 2237576 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2310316 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2526063 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 923136 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 2309937 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2485508 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2555680 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 3146435 | 48057851 ~ 48064453 (-) |
