Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815184 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 44993977 ~ 44994624 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| piggyBac transposable element-derived protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2076622 | True | 284 | lncRNA | 0.42 | 2 | 44993977 | 44994624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943612 | NA | coding | downstream | 26843 | 44965636 ~ 44967134 (-) |
| LOC110501930 | hoxd12ab | coding | downstream | 31098 | 44959757 ~ 44962879 (-) |
| LOC110501928 | hoxd11ab | coding | downstream | 37912 | 44954300 ~ 44956065 (-) |
| LOC110501926 | hoxd10ab | coding | downstream | 43607 | 44947662 ~ 44950370 (-) |
| LOC110501927 | hoxd9ab | coding | downstream | 48690 | 44943212 ~ 44945287 (-) |
| LOC110502174 | LOC106572616 | coding | upstream | 369866 | 45343530 ~ 45365813 (-) |
| LOC118943595 | LOC106582449 | coding | upstream | 425261 | 45419885 ~ 45432246 (-) |
| LOC110501936 | LOC106572616 | coding | upstream | 462602 | 45457226 ~ 45458628 (-) |
| LOC118943614 | gdf3 | coding | upstream | 525223 | 45519847 ~ 45520832 (-) |
| LOC110501935 | gdf3 | coding | upstream | 538473 | 45533097 ~ 45543990 (-) |
| G1815143 | NA | non-coding | downstream | 78363 | 44915336 ~ 44915614 (-) |
| G1814669 | NA | non-coding | downstream | 95602 | 44897801 ~ 44898375 (-) |
| G1814665 | NA | non-coding | downstream | 98335 | 44895408 ~ 44895642 (-) |
| G1814653 | NA | non-coding | downstream | 108954 | 44884815 ~ 44885023 (-) |
| G1815196 | NA | non-coding | upstream | 26674 | 45021298 ~ 45040004 (-) |
| G1815198 | NA | non-coding | upstream | 28900 | 45023524 ~ 45024465 (-) |
| G1815218 | NA | non-coding | upstream | 48705 | 45043329 ~ 45043619 (-) |
| G1815235 | NA | non-coding | upstream | 81482 | 45076106 ~ 45076336 (-) |
| G1815238 | NA | non-coding | upstream | 87638 | 45082262 ~ 45082731 (-) |
| G1814480 | NA | other | downstream | 320089 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 440557 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 2316217 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2388957 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2604704 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 844126 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 2230927 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2406498 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2476670 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 3067425 | 48057851 ~ 48064453 (-) |
