Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815196 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45021298 ~ 45040004 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2076635 | True | 551 | lncRNA | 0.36 | 2 | 45021298 | 45040004 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943612 | NA | coding | downstream | 54164 | 44965636 ~ 44967134 (-) |
| LOC110501930 | hoxd12ab | coding | downstream | 58419 | 44959757 ~ 44962879 (-) |
| LOC110501928 | hoxd11ab | coding | downstream | 65233 | 44954300 ~ 44956065 (-) |
| LOC110501926 | hoxd10ab | coding | downstream | 70928 | 44947662 ~ 44950370 (-) |
| LOC110501927 | hoxd9ab | coding | downstream | 76011 | 44943212 ~ 44945287 (-) |
| LOC110502174 | LOC106572616 | coding | upstream | 324486 | 45343530 ~ 45365813 (-) |
| LOC118943595 | LOC106582449 | coding | upstream | 379881 | 45419885 ~ 45432246 (-) |
| LOC110501936 | LOC106572616 | coding | upstream | 417222 | 45457226 ~ 45458628 (-) |
| LOC118943614 | gdf3 | coding | upstream | 479843 | 45519847 ~ 45520832 (-) |
| LOC110501935 | gdf3 | coding | upstream | 493093 | 45533097 ~ 45543990 (-) |
| G1815184 | NA | non-coding | downstream | 26674 | 44993977 ~ 44994624 (-) |
| G1815143 | NA | non-coding | downstream | 105684 | 44915336 ~ 44915614 (-) |
| G1814669 | NA | non-coding | downstream | 122923 | 44897801 ~ 44898375 (-) |
| G1814665 | NA | non-coding | downstream | 125656 | 44895408 ~ 44895642 (-) |
| G1815218 | NA | non-coding | upstream | 3325 | 45043329 ~ 45043619 (-) |
| G1815235 | NA | non-coding | upstream | 36102 | 45076106 ~ 45076336 (-) |
| G1815238 | NA | non-coding | upstream | 42258 | 45082262 ~ 45082731 (-) |
| G1815243 | NA | non-coding | upstream | 57386 | 45097390 ~ 45097634 (-) |
| G1815249 | NA | non-coding | upstream | 69727 | 45109731 ~ 45110221 (-) |
| G1814480 | NA | other | downstream | 347410 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 467878 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 2343538 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2416278 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2632025 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 798746 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 2185547 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2361118 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2431290 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 3022045 | 48057851 ~ 48064453 (-) |
