XLOC_037282 (gpr161)


Basic Information

Item Value
gene id XLOC_037282
gene name gpr161
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34148714 ~ 34162374 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073367
ACGTCACCAGCGCCTCTTTATTCACCGCCGACCGCAGCAGCCGCAACAAATGAACGTCTCGTAATCAGTTAATACTTTGTAACCGCTTTAAAACTTGGAAAATGCGTCTCTGGGAAGTGTTATCGTTCCGCGAGAGCGTGAGAAAACCGAGCATCTTACAGGAGGAGAGAAAGTTTGGATTAAAGTTAGTAGCCGCTGTCTAACAAAGCCAGTCTGGAGAAAGTTACTCCTGCTGCTGCACCATAGCGGGATCTCGCCTCGACAGGCCCCGAGAACTGTTTGTCAACATGCCTCTCAAGTCATTGGCAACCAGAAGCCTCCCATAATGAACGGCTCTAAGAATGGGACGGCGGTGGCCAACTCCACTAATGGCCTGGATGACAACGGGCTCATGGTCCTGGAGTCTGTCTCTATCATCATCATAGCCATACTGGCATGTCTGGGGAATCTGGTCATTGTGGTGACTCTTTATAAAAAGCCCTACTTGCTAACACCCAGCAACAAGTTTGTCTTCAGCCTGACTTCATCCAATTTGCTATTATCAGTTCTAATGCTGCCGTTTGTTGTGGCCAGTTCGGTGCGTCGGGATTGGATGTTTGGGGTGGTGTGGTGCAATTTCACAGCGCTGCTCCATCTACTTGTCAGCTCATCTAGCATGCTTACACTTGGAGCCATTGCCATTGACAGGTACTATGCAGTATTATACCCCATGATCTACCCCATGAAAATCACCGGAAATCGAGCTGTGCTTGCAATCGTTTACATCTGGCTCCATTCCCTAGTTGGCTGCCTGCCGCCTCTTTTCGGATGGTCATCGTTTGAGTTTGACCGCTTCAAATGGACCTGCACGGTGTCCTGGCACAAGGAGATCAGCTATACTGCCTTTTGGGTTACATGGTGTTGCCTTTTGCCGCTGGTGGCCATGTTGGTCTGCTACGGAGTAATTTTCCGCGTAGCTCGCATCAAAGCTCGTAAGGTTTATTGCGGCAGTGTTGTGGTGTCTCAAGAAGAGTCCAGCTCTCAAAATAATGGCCGCAAAAACTCCAACACCTCAACATCTTCTAGTGGCAGCCGCAAAAGCCTGATTTACTCTGGGAGCCAATGCAAGGCCTTCATCACCATTTTAGTGGTTCTGGGGACATTTCTGACCACTTGGGGTCCTTATGTGGTTGTTATCAGCACCGAAGCACTATTAGGGAAAAATAGTGTTTCTCCACAAGTTGAGACGCTGGTTTCTTGGCTGTCTTTTACCAGTGCTGTGTGTCATCCACTTATTTATGGGCTGTGGAACAAGACTGTACGCAAGGAGCTGTTGGGGATGTGTTTTGACGATCGGTACTACAGAGAGTCATTTGTTATACGGCACCGGACCTCTCGTCTGTTTAGCATCTCAAACCGGATAACAGATTTAGGGATGTCTCCTCATCTGACGGCCATGTTGGTTGGTGGAGGTCAGCTTTTGGGCCGTGGAAGCAGCACTGGAGACACTGGCTTCAGCTACACACAAGACTCAGCAACAGACGTCATGCTGTTGGAGAGCTACACCTCAGAGGCGTCCCACTCAGCCCACTGCACCGCCAATAAGAGGAGGAGCTCGGTCACATTCGAGGACCAAGTGGATCACATACCACAAGGTGACCCTTCAGTAGTCCAAGTGACGGCAGACATCCACAAATCTTTGGACAGTTTTGCATCCTCTCTGGCCAAGGCTATAGAGAACGACGCCAAGCTTCAGCTCTTAGGAGAATGGACACAAATTCCCACAAGTCTGTTCACAGTTCGAAACACACAGCGAGTGCCTCGGTATCTGGACGGACAGAGACTCAGGATGGAAAGCATCGATGAAGGAATAGtcaaagatgatgatgatgatgaagaagaaatGGAGCGCGAGGAAAAAATGTAGTTCTTTCGACTGTGAACTTCTTCAAGGATCAGATTGTTATTTAATCTGCAGCTTTTGAAGGTACAGAATGTTATACAAACACATTGGCACATGTTTACAGATAAGACTGGCATACTATGTAATAAACTTGACTGTTTTAGCAAGCAACTGCTGCTGCTACATGCTTTCGTGAGACCAAAGCGCGACCATGATTGCTGTACCGCCAATGTTTCAGGTACTAGAAGCCCTACTGCATCTCACCAGAATATGTTTTTGTAACATAAAAGATACTGTAAAGTTATGTACAGCCGTCATATATGGTCAGGTGTTTGCGTTTAAatgtttacttcttttttttaatacaagGAAATTGTAATCACTCTTTTATATGTACTGTTTGTAATTATGTTTGCTCCTCTCCAATTTTTCATGTTCAGGtttgataatataataaaataactgaaGTGCT
>TCONS_00073368
ATGAACGGCTCTAAGAATGGGACGGCGGTGGCCAACTCCACTAATGGCCTGGATGACAACGGGCTCATGGTCCTGGAGTCTGTCTCTATCATCATCATAGCCATACTGGCATGTCTGGGGAATCTGGTCATTGTGGTGACTCTTTATAAAAAGCCCTACTTGCTAACACCCAGCAACAAGTTTGTCTTCAGCCTGACTTCATCCAATTTGCTATTATCAGTTCTAATGCTGCCGTTTGTTGTGGCCAGTTCGGTGCGTCGGGATTGGATGTTTGGGGTGGTGTGGTGCAATTTCACAGCGCTGCTCCATCTACTTGTCAGCTCATCTAGCATGCTTACACTTGGAGCCATTGCCATTGACAGGTACTATGCAGTATTATACCCCATGATCTACCCCATGAAAATCACCGGAAATCGAGCTGTGCTTGCAATCGTTTACATCTGGCTCCATTCCCTAGTTGGCTGCCTGCCGCCTCTTTTCGGATGGTCATCGTTTGAGTTTGACCGCTTCAAATGGACCTGCACGGTGTCCTGGCACAAGGAGATCAGCTATACTGCCTTTTGGGTTACATGGTGTTGCCTTTTGCCGCTGGTGGCCATGTTGGTCTGCTACGGAGTAATTTTCCGCGTAGCTCGCATCAAAGCTCGTAAGGTTTATTGCGGCAGTGTTGTGGTGTCTCAAGAAGAGTCCAGCTCTCAAAATAATGGCCGCAAAAACTCCAACACCTCAACATCTTCTAGTGGCAGCCGCAAAAGCCTGATTTACTCTGGGAGCCAATGCAAGGCCTTCATCACCATTTTAGTGGTTCTGGGGACATTTCTGACCACTTGGGGTCCTTATGTGGTTGTTATCAGCACCGAAGCACTATTAGGGAAAAATAGTGTTTCTCCACAAGTTGAGACGCTGGTTTCTTGGCTGTCTTTTACCAGTGCTGTGTGTCATCCACTTATTTATGGGCTGTGGAACAAGACTGTACGCAAGGAGCTGTTGGGGATGTGTTTTGACGATCGGTACTACAGAGAGTCATTTGTTATACGGCACCGGACCTCTCGTCTGTTTAGCATCTCAAACCGGATAACAGATTTAGGGATGTCTCCTCATCTGACGGCCATGTTGGTTGGTGGAGGTCAGCTTTTGGGCCGTGGAAGCAGCACTGGAGACACTGGCTTCAGCTACACACAAGACTCAGCAACAGACGTCATGCTGTTGGAGAGCTACACCTCAGAGGCGTCCCACTCAGCCCACTGCACCGCCAATAAGAGGAGGAGCTCGGTCACATTCGAGGACCAAGTGGATCACATACCACAAGGTGACCCTTCAGTAGTCCAAGTGACGGCAGACATCCACAAATCTTTGGACAGTTTTGCATCCTCTCTGGCCAAGGCTATAGAGAACGACGCCAAGCTTCAGCTCTTAGGAGAATGGACACAAATTCCCACAAGTCTGTTCACAGTTCGAAACACACAGCGAGTGCCTCGGTATCTGGACGGACAGAGACTCAGGATGGAAAGCATCGATGAAGGAATAGtcaaagatgatgatgatgatgaagaagaaatGGAGCGCGAGGAAAAAATGTAGTTCTTTCGACTGTGAACTTCTTCAAGGATCAGATTGTTATTTAATCTGCAGCTTTTGAAGGTACAGAATGTTATACAAACACATTGGCACATGTTTACAGATAAGACTGGCATACTATGTA

Function

symbol description
gpr161 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning. Predicted to be located in cilium. Predicted to be active in recycling endosome.

GO: NA

KEGG:

id description
ko04340 Hedgehog signaling pathway
ko04030 G protein-coupled receptors

Ensembl:

ensembl_id ENSDARG00000055659

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073367 False 2354 mRNA 0.46 6 34148714 34162374
TCONS_00073368 True 1702 mRNA 0.48 5 34151367 34162047

Neighbor

gene id symbol gene type direction distance location
XLOC_037281 f5 coding upstream 718 34127005 ~ 34147996 (+)
XLOC_037280 ccdc80 coding upstream 35505 34089156 ~ 34113209 (+)
XLOC_037279 NA coding upstream 140148 33997142 ~ 34008566 (+)
XLOC_037278 kdm6a coding upstream 286590 33788389 ~ 33862124 (+)
XLOC_037277 BX572627.1 coding upstream 348958 33783061 ~ 33799756 (+)
XLOC_037283 mpc2 coding downstream 59623 34221997 ~ 34227472 (+)
XLOC_037284 nxpe3 coding downstream 67693 34230067 ~ 34243967 (+)
XLOC_037285 NA coding downstream 124380 34286754 ~ 34296124 (+)
XLOC_037286 pou2f1b coding downstream 156959 34319333 ~ 34378674 (+)
XLOC_037287 NA coding downstream 208486 34370860 ~ 34378332 (+)
XLOC_037276 NA non-coding upstream 384537 33726683 ~ 33764177 (+)
XLOC_037270 BX545856.2 non-coding upstream 902959 33244198 ~ 33245755 (+)
XLOC_037261 BX511259.1 non-coding upstream 1066533 33074680 ~ 33082181 (+)
XLOC_037257 NA non-coding upstream 1253614 32891897 ~ 32895100 (+)
XLOC_037289 NA non-coding downstream 228077 34390451 ~ 34391153 (+)
XLOC_037293 BX601644.1 non-coding downstream 628376 34790750 ~ 34790887 (+)
XLOC_037294 BX601644.6 non-coding downstream 660475 34822849 ~ 34828098 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00014331 NA coding CM030128.1 CM030128.1 9358847 ~ 9367036 (-)