Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815260 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45118988 ~ 45120709 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: talin-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2076700 | True | 490 | lncRNA | 0.35 | 3 | 45118988 | 45120709 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943612 | NA | coding | downstream | 151854 | 44965636 ~ 44967134 (-) |
| LOC110501930 | hoxd12ab | coding | downstream | 156109 | 44959757 ~ 44962879 (-) |
| LOC110501928 | hoxd11ab | coding | downstream | 162923 | 44954300 ~ 44956065 (-) |
| LOC110501926 | hoxd10ab | coding | downstream | 168618 | 44947662 ~ 44950370 (-) |
| LOC110501927 | hoxd9ab | coding | downstream | 173701 | 44943212 ~ 44945287 (-) |
| LOC110502174 | LOC106572616 | coding | upstream | 243781 | 45343530 ~ 45365813 (-) |
| LOC118943595 | LOC106582449 | coding | upstream | 299176 | 45419885 ~ 45432246 (-) |
| LOC110501936 | LOC106572616 | coding | upstream | 336517 | 45457226 ~ 45458628 (-) |
| LOC118943614 | gdf3 | coding | upstream | 399138 | 45519847 ~ 45520832 (-) |
| LOC110501935 | gdf3 | coding | upstream | 412388 | 45533097 ~ 45543990 (-) |
| G1815253 | yo84 | non-coding | downstream | 3592 | 45115087 ~ 45115396 (-) |
| G1815250 | NA | non-coding | downstream | 7883 | 45110415 ~ 45111105 (-) |
| G1815249 | NA | non-coding | downstream | 8767 | 45109731 ~ 45110221 (-) |
| G1815243 | NA | non-coding | downstream | 21354 | 45097390 ~ 45097634 (-) |
| G1815238 | NA | non-coding | downstream | 36257 | 45082262 ~ 45082731 (-) |
| G1815262 | NA | non-coding | upstream | 1503 | 45122212 ~ 45122439 (-) |
| G1815256 | NA | non-coding | upstream | 44340 | 45165049 ~ 45172215 (-) |
| G1815303 | NA | non-coding | upstream | 61483 | 45182192 ~ 45233653 (-) |
| G1815310 | NA | non-coding | upstream | 77101 | 45197810 ~ 45210641 (-) |
| G1815311 | NA | non-coding | upstream | 89365 | 45210074 ~ 45222788 (-) |
| G1814480 | NA | other | downstream | 445100 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 565568 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 2441228 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2513968 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2729715 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 718041 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 2104842 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2280413 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2350585 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 2941340 | 48057851 ~ 48064453 (-) |
