XLOC_037284 (nxpe3)


Basic Information

Item Value
gene id XLOC_037284
gene name nxpe3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34230067 ~ 34243967 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073371
CTGacgtgaagcagcagcagctccgtgtttcctgtgtttttattaacattattgtccctcatcagCATGCAATAATGGCCAGCCATGAGCAACTGTAGTGGTGGACAGAAGGATGACCGAGAGAGGAAATGATGGAGAAATACTTTCCCAAATACGTCCCTTTCTTCAGTCTGCTGGCGCTGTCAGGACTGCTGTATCTGCTGTGGAGCATCACCTCGCTGGAGAGCTGGAACTGTCAGACAGTATCAACCTTCTATCAGCTTCAAAACAGCATCCAGTCAGTCTTGAAAACCTCTGAGCTTCTTCTGCCCACGGAGTTCAACTACTCGTTCTGTGCCCACCTTGGCCAGGAGCCCACTTTAGAGGAGGCCAGAGAGGAGAGTTACCTTCTCAAATCCATTGCCTGGCCAGAGCCGTCAACTCTGGGACTGCCTCTGCGTCAAAGTAGCGACCCAGCACAAAGCTATTACACCATCCAAGACACTGGAGACCTGCGGGTCGGAGGGCAGCTGGCGGTCAAAGTGCAGATTCACAACTTTTTGGGCCAACCCAAAAAACACGGAGGAGACTTTCTAGTAGCACGACTTCACACACC
>TCONS_00073372
GCTGCTTTCTTCTGTTTACACATGGGGCGGAAATGAGGATGCGTGCTTGAGTGTTAGCAAAGCGTCTGGACGTATATAGGCTGCTCGTTGTTCTTTAATCTTATCTACTGATGTCCGCTTAAGGCACTGGATTATTTAGTTAATATCTGGTGGACTGTTGTTCTTGATGTTGGCGTCATGAGGGATAAAACAACGCTGTCAGCAGCAGCGGCGCTGCAGTACTGCAACATCGTTGCAGATGCATGCAATAATGGCCAGCCATGAGCAACTGTAGTGGTGGACAGAAGGATGACCGAGAGAGGAAATGATGGAGAAATACTTTCCCAAATACGTCCCTTTCTTCAGTCTGCTGGCGCTGTCAGGACTGCTGTATCTGCTGTGGAGCATCACCTCGCTGGAGAGCTGGAACTGTCAGACAGTATCAACCTTCTATCAGCTTCAAAACAGCATCCAGTCAGTCTTGAAAACCTCTGAGCTTCTTCTGCCCACGGAGTTCAACTACTCGTTCTGTGCCCACCTTGGCCAGGAGCCCACTTTAGAGGAGGCCAGAGAGGAGAGTTACCTTCTCAAATCCATTGCCTGGCCAGAGCCGTCAACTCTGGGACTGCCTCTGCGTCAAAGTAGCGACCCAGCACAAAGCTATTACACCATCCAAGACACTGGAGACCTGCGGGTCGGAGGGCAGCTGGCGGTCAAAGTGCAGATTCACAACTTTTTGGGCCAACCCAAAAAACACGGAGGAGACTTTCTAGTAGCACGACTTCACACACCAGAGTTGGTGGCAGGAGTCGCGGGGCAGGTCCGTGACCACAACAATGGAAACTACACAATATTTTTCCCGCTGCTTTGGGCAGGTGTTGCCCAGGTGGAGCTGACAATGATTCACTCCAGCGAAGCCGTGATGGTCCTTAAGCGACTGAGAGAGGAGCAGTCGGACAGAGTGTTTTTCAAGAGCCTCTTCCGCTCGGGTTACATCTCTGAATCCACTCTGTGTAATCTGTGTTTGCCGCTCAAACCGCAGCCGCTTTGCAACTACACAGACCCCCAGACTGGAGAACCCTGGTACTGTTATAAGCCTAAGATGTTGGACTGTGATACACGGATAAACCACTCCAAAGGGGGGTATAAGAAAAACCTTCTCACTGTTTATGAGTCACAGTTCTTCCAAAGTGGAGTAAATATCAAAGTTCCAATACATTCTGCAGGGGTGGACAATGTGACTGTTCTGCCTGCTTCTAAAGTACGAACCAAAAAGATGCGTCTTGAATTCACTCCGTCCGGTTACTACTACCAGGGATCATGGAGGCCGTTGAGTGGTGTGGTCCCGCGTCAGTTCAATACCTCTTCACTCATAAACCAGTGTCTTAGAGGCAAAATGCTCTACATGTATGGAGACTCCACTGTGAGGCAATGGTACGAGTATCTTATCACAAACGTCCCAGAGTTCAAAGAATTCAACTTTCACAGCGCAAAGAATGTGGGGCCTTACATGGGAGTGAACATGAACTACAACGCACTGTTGAAGTACCGCTGCCACGGACCGCCTATCCGCTTCACCTCAGTCTCCTCAGCTGAGATGCGCTACATCTCAAACGAGCTGGACGGCTTGAGCGGGGGTTCAGACACAGTGGTTGTGATTAGCATCTGGTCACATTTCAGCACTTACCCAGTGGCCGTGTACATACGACGCTTGCGCCACATCCGCAAGGCCGTAATCCGACTGCTAAACCGAGAACCCACCACTCTCGTGTTCATACGCACCGGCAACCTCCAGAAGTTGGACGCAGAGTCTAGCTTGTTCAACAGCGACTGGTTTTCCCAACAGCTTGACACAGTGCTGAGAGCCATGTTTAAAGGTCTAAACGTTCAGCTGGTGGACGCCTGGGAGATGACGCTCGCCCACCACCACCCGCATCAACTGCACCCTCAACTCGACATTGTATCCAACATGGTAAACTTCATCCTTTCCCACATCTGCCCagtgagaaaaaagaaaaaacgcgGTTAGCTTATGCATGCGCTGTTTGTGGGCATTCTTGAGGAACTAGTGAGTTTGCTCTTACCTCTGGCTTTGGGATCAGCTCTTTCGCTATGTATTCAGCCATTGTTTGCTTTGTGTTTAAACTTACAAATGACCGTGATGATTTTGCTTGCAATATTAAAATGCAAAAGCATCAGAAGTTAATGTAGCCTTTGGCAATTTGCACCGATACCGATATCGTTATTGGGCTCGATGCTGAGCTCACGTACTCCGATACCAAAGACAGATACCTACTTTTGATTGTTACACAACATTGAACGTTGTTATATAGTGGTATGCTACAATGTTTGTTTGGGGGAATAAGATTTGGAGCTTTTTGACAACTTTGTGACCGGTCGATGAggatttttattgaattttattatgtccttggtttgctaaatgtttgtgaaatgttttgtgccactttgtgacaaacagaaaaagcagtttgagttattgttgtttaaaattaCAGAGAAGCTGTGCTAAAGTTAA

Function

symbol description
nxpe3 Predicted to be located in extracellular region. Orthologous to human NXPE3 (neurexophilin and PC-esterase domain family member 3).

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061013-214 Predicted to be located in extracellular region. Orthologous to human NXPE3 (neurexophilin and PC-esterase domain family member 3).

Ensembl:

ensembl_id ENSDARG00000061690

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073371 False 595 mRNA 0.51 3 34230067 34238980
TCONS_00073372 True 2518 mRNA 0.48 6 34232503 34243967

Neighbor

gene id symbol gene type direction distance location
XLOC_037283 mpc2 coding upstream 2595 34221997 ~ 34227472 (+)
XLOC_037282 gpr161 coding upstream 67693 34148714 ~ 34162374 (+)
XLOC_037281 f5 coding upstream 82071 34127005 ~ 34147996 (+)
XLOC_037280 ccdc80 coding upstream 116858 34089156 ~ 34113209 (+)
XLOC_037279 NA coding upstream 221501 33997142 ~ 34008566 (+)
XLOC_037285 NA coding downstream 42787 34286754 ~ 34296124 (+)
XLOC_037286 pou2f1b coding downstream 75366 34319333 ~ 34378674 (+)
XLOC_037287 NA coding downstream 126893 34370860 ~ 34378332 (+)
XLOC_037288 lamp1b coding downstream 136332 34380299 ~ 34389875 (+)
XLOC_037289 NA coding downstream 146484 34390451 ~ 34391153 (+)
XLOC_037276 NA non-coding upstream 465890 33726683 ~ 33764177 (+)
XLOC_037270 BX545856.2 non-coding upstream 984312 33244198 ~ 33245755 (+)
XLOC_037261 BX511259.1 non-coding upstream 1147886 33074680 ~ 33082181 (+)
XLOC_037257 NA non-coding upstream 1334967 32891897 ~ 32895100 (+)
XLOC_037293 BX601644.1 non-coding downstream 546783 34790750 ~ 34790887 (+)
XLOC_037294 BX601644.6 non-coding downstream 578882 34822849 ~ 34828098 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location