G1815482


Basic Information

Item Value
gene id G1815482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45584967 ~ 45585487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2076974
ggtgccattaatacaggtaacgagtggaggacagaggagcctcttaaagaagaagatacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttatttcccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctggattttttccccctcattttgcctgtcatagttgaagtgtacctatgaatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatgtatgtatgtatgtatgttgttggaggctattttgtaaatgacatcgccaaagtcgaggattgataggatggtcagttttacgaggatatgtttggcagcatgagtgatggatgctttgttgcaaaataggaagccgattctagatttcattttggattggagatgtttaatgtgagtctggaaggagagtttacagtcagaactgtccagagtagtgatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2076974 True 501 lncRNA 0.39 2 45584967 45585487

Neighbor

gene id symbol gene type direction distance location
LOC110501933 LOC106582484 coding downstream 6061 45550854 ~ 45578906 (-)
LOC110501935 gdf3 coding downstream 40977 45533097 ~ 45543990 (-)
LOC118943614 gdf3 coding downstream 64135 45519847 ~ 45520832 (-)
LOC110501936 LOC106572616 coding downstream 126339 45457226 ~ 45458628 (-)
LOC118943595 LOC106582449 coding downstream 152721 45419885 ~ 45432246 (-)
LOC110501932 LOC106582487 coding upstream 117466 45702953 ~ 45726394 (-)
LOC118943596 NA coding upstream 425628 46011115 ~ 46028506 (-)
ints6 LOC106582497 coding upstream 533901 46119388 ~ 46156972 (-)
spopla spopl coding upstream 1284344 46869775 ~ 46974132 (-)
LOC110501995 hnmt coding upstream 1456738 47042225 ~ 47061327 (-)
G1815475 NA non-coding downstream 8079 45576523 ~ 45576888 (-)
G1815466 NA non-coding downstream 36096 45548385 ~ 45548871 (-)
G1815463 NA non-coding downstream 38548 45546133 ~ 45546419 (-)
G1815400 NA non-coding downstream 135806 45389697 ~ 45449161 (-)
G1815488 NA non-coding upstream 6698 45592185 ~ 45595699 (-)
G1815516 NA non-coding upstream 54728 45640215 ~ 45643396 (-)
G1815523 NA non-coding upstream 71070 45656557 ~ 45657002 (-)
G1815544 NA non-coding upstream 110605 45696092 ~ 45697548 (-)
G1815562 NA non-coding upstream 175699 45761186 ~ 45761462 (-)
G1814480 NA other downstream 911079 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 1031547 44473683 ~ 44553607 (-)
G1812404 NA other downstream 2907207 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 2979947 42603998 ~ 42605768 (-)
G1812079 LOC106582433 other downstream 3195694 42386822 ~ 42389273 (-)
G1815615 LOC106582489 other upstream 253263 45838750 ~ 45840982 (-)
G1816841 NA other upstream 1640064 47225551 ~ 47226646 (-)
G1816929 NA other upstream 1815635 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 1885807 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 2476562 48057851 ~ 48064453 (-)

Expression


Co-expression Network