Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815604 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45797634 ~ 45797878 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2077130 | True | 245 | lncRNA | 0.56 | 1 | 45797634 | 45797878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501932 | LOC106582487 | coding | downstream | 71240 | 45702953 ~ 45726394 (-) |
| LOC110501943 | NA | coding | downstream | 209922 | 45582551 ~ 45587712 (-) |
| LOC110501933 | LOC106582484 | coding | downstream | 218728 | 45550854 ~ 45578906 (-) |
| LOC110501935 | gdf3 | coding | downstream | 253644 | 45533097 ~ 45543990 (-) |
| LOC118943614 | gdf3 | coding | downstream | 276802 | 45519847 ~ 45520832 (-) |
| LOC118943596 | NA | coding | upstream | 213237 | 46011115 ~ 46028506 (-) |
| ints6 | LOC106582497 | coding | upstream | 321510 | 46119388 ~ 46156972 (-) |
| spopla | spopl | coding | upstream | 1071953 | 46869775 ~ 46974132 (-) |
| LOC110501995 | hnmt | coding | upstream | 1244347 | 47042225 ~ 47061327 (-) |
| LOC110501994 | hnmt | coding | upstream | 1288993 | 47086871 ~ 47103828 (-) |
| G1815578 | NA | non-coding | downstream | 15127 | 45781758 ~ 45782507 (-) |
| G1815575 | NA | non-coding | downstream | 21126 | 45776242 ~ 45776508 (-) |
| G1815573 | NA | non-coding | downstream | 26553 | 45770807 ~ 45771081 (-) |
| G1815572 | NA | non-coding | downstream | 27915 | 45769489 ~ 45769719 (-) |
| G1815562 | NA | non-coding | downstream | 36172 | 45761186 ~ 45761462 (-) |
| G1815605 | NA | non-coding | upstream | 1100 | 45798978 ~ 45799596 (-) |
| G1815715 | NA | non-coding | upstream | 69975 | 45867853 ~ 45868099 (-) |
| G1815720 | NA | non-coding | upstream | 82456 | 45880334 ~ 45880534 (-) |
| G1815725 | NA | non-coding | upstream | 93104 | 45890982 ~ 45891238 (-) |
| G1815727 | NA | non-coding | upstream | 97215 | 45895093 ~ 45895296 (-) |
| G1814480 | NA | other | downstream | 1123746 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 1244214 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 3119874 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 3192614 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 3408361 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 40872 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 1427673 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 1603244 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 1673416 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 2264171 | 48057851 ~ 48064453 (-) |
