G1815615 (LOC106582489)


Basic Information

Item Value
gene id G1815615
gene name LOC106582489
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45838750 ~ 45840982 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2077141
AACATAATCATCGTCATTGATTCATTTGAAATCCCATccaaaataagtaaataaatataatttagcacttttttataaaaaaataaagaagtgATCATTCTTTGCGTGCGTTGTGACGGGCATGcttggcaacaacaacaaaacatggaAAGAGGAAACATACATGAGAAAACAGCCATCTATAGGATCGGCAGGGACGTTGGAGAGAAAATACTGAAAGGACATATTGTACAAGTGGCAGAGGAAGAAACAGGAGCAACATGGTACAGGAGGAAGAAACAGGAGCAACATGGTACAGGAGGAAGAAACAGGAGCAACATGGTACAGGAGGAAGAAACAGGAGCAACATGGTACAGGAGGAGGAAGCAGGAGCAACATGGTACAGGAGGAAGAAGCAGGAGCAACATGGTACAGGAGGAAGAAGCAGGAGCAACATGGTACCAGCGCTACATGGCTGAAAGCAGACACAAGCTAAAAGTGTAAATCCACACATTAACCAAGGGCCTGATATAAAAACTATCGTACAAACAGAAATCTGAATCTACAAATTTACAATCTACATGACCATTGTGTTCTCAAGCCGTATGCTTTACCTACATAGTGTACTTTCGTTTATTCTGTCTCGGGAATGCGCTAGTCTAAAGTTAAATAATGATCGAGAACATGACATTGAAAGACATCAGTAATGCCCTTCGTATAATGTGTATTCCCGTCAGACACAATGTGAGATAGGTTTGCATACAGTGACGGGTTTTACTGAATATTAAAAGCACCCTTTATATATTTATCTAAATCATGCTACAACATGGTATGTAAGTAGCGCTCCTCCCATTTTCTAAAGCAATGCATTTCTGCTGGCTCAATCCAACATTTATTTCAGCAACAGATAAATAAAAATCAAAAAGACGTGTTGGACTGATATACACCGTGACGTCTTCAACCCAAAGTTAAtttcccttttctccctctcgtTTTATGATAAGAGTTCAAGTCATTTGGAGTCACTCGTCAGCCTGGACATTGTGACAGCGCTCATGCCGGAAACATGTGGTGGCACCTGGCACATGCTGCATGGACAGGGCATTCCCGCGCCCCAGTGATGGAAACTGCTACCCAGGGGGCCCGGGACGGCCGAGGGCGCCTTCAGGAGTCCATGGTGGGGTCTGATCGAGGTGAGACCcgttgtagagagagaggcaacCGTGGAGACTGCCGGGGGAAGAAGTGGATGGTGCACCGGGTGGGAGGCGTGGGAAACCGCCGGATGACCAGGCAGGGGCCCAGTGTGCGCCATGGTACCACATGCGGAGGGGTGGAAGCTGCTGTGGTGGCCGCTGCCGTAGAACTCACTGACAAGCCTCTTCATCTCCTCCAGCGAGTTGCTCAGCATCAGGATGTAGTTTCTCGCCAGAAGGAGAGTAGCGATTTTGGAGAGTTTGCGCACCGAGGGCCCGTGCGCGTAAGGCATGACCTCCCGGAGACCGTCCATGGCGATGTTGAGGTCGTGCATCCTCTTCCGCTCCCGGCTGTTGATTTTCAGCCGCATCCCCTGCAGCTCGTTCTCCGAGAGCAGTTTACGGTCCTTCTTCGACAGCATTTTCAGGGTAATGTCATCGTCGTCATCCGACAGGCTCCGCATGTCCGCGGGTATCTCCGGTGGAGAGTCGCTCTGTGTGGACGAGACAGTACCGGAGAAACCCACCATGTGTTTCTTCACCGCATGCAGGAACATATCGTGCACATCGGGAGAGGAAGGTCGGCTAGACACTCGGCCGGTACCGGAGTCCATGATGATCCTCAGGTTTATTCGGACAGCGCAATAGTCgagagagagagagcgagatgcagAGCGCAGCTCGGTGCAGAGAAAGTGTCGCTGTTCAATCCACTTGTTACTCCCAATCACAACT

Function

NR:

description
oligodendrocyte transcription factor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2077141 True 1910 TUCP 0.49 2 45838750 45840982

Neighbor

gene id symbol gene type direction distance location
LOC110501932 LOC106582487 coding downstream 112356 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 251038 45582551 ~ 45587712 (-)
LOC110501933 LOC106582484 coding downstream 259844 45550854 ~ 45578906 (-)
LOC110501935 gdf3 coding downstream 294760 45533097 ~ 45543990 (-)
LOC118943614 gdf3 coding downstream 317918 45519847 ~ 45520832 (-)
LOC118943596 NA coding upstream 170133 46011115 ~ 46028506 (-)
ints6 LOC106582497 coding upstream 278406 46119388 ~ 46156972 (-)
spopla spopl coding upstream 1028849 46869775 ~ 46974132 (-)
LOC110501995 hnmt coding upstream 1201243 47042225 ~ 47061327 (-)
LOC110501994 hnmt coding upstream 1245889 47086871 ~ 47103828 (-)
G1815605 NA non-coding downstream 39154 45798978 ~ 45799596 (-)
G1815604 NA non-coding downstream 40872 45797634 ~ 45797878 (-)
G1815578 NA non-coding downstream 56243 45781758 ~ 45782507 (-)
G1815575 NA non-coding downstream 62242 45776242 ~ 45776508 (-)
G1815573 NA non-coding downstream 67669 45770807 ~ 45771081 (-)
G1815715 NA non-coding upstream 26871 45867853 ~ 45868099 (-)
G1815720 NA non-coding upstream 39352 45880334 ~ 45880534 (-)
G1815725 NA non-coding upstream 50000 45890982 ~ 45891238 (-)
G1815727 NA non-coding upstream 54111 45895093 ~ 45895296 (-)
G1815747 NA non-coding upstream 87485 45928467 ~ 45928704 (-)
G1814480 NA other downstream 1164862 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 1285330 44473683 ~ 44553607 (-)
G1812404 NA other downstream 3160990 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 3233730 42603998 ~ 42605768 (-)
G1812079 LOC106582433 other downstream 3449477 42386822 ~ 42389273 (-)
G1816841 NA other upstream 1384569 47225551 ~ 47226646 (-)
G1816929 NA other upstream 1560140 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 1630312 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 2221067 48057851 ~ 48064453 (-)
G1817668 NA other upstream 2427805 48268787 ~ 48291496 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037957 olig2 coding NC_007120.7 CM002893.2 32751428 ~ 32753535 (-)
bowfin (Amia calva) AMCG00014761 olig3 coding CM030128.1 CM030128.1 30093412 ~ 30094212 (+)