Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815705 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45938515 ~ 45938801 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| DNA excision repair protein ERCC-1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2077244 | True | 194 | lncRNA | 0.52 | 2 | 45938515 | 45938801 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501932 | LOC106582487 | coding | downstream | 212121 | 45702953 ~ 45726394 (-) |
| LOC110501943 | NA | coding | downstream | 350803 | 45582551 ~ 45587712 (-) |
| LOC110501933 | LOC106582484 | coding | downstream | 359609 | 45550854 ~ 45578906 (-) |
| LOC110501935 | gdf3 | coding | downstream | 394525 | 45533097 ~ 45543990 (-) |
| LOC118943614 | gdf3 | coding | downstream | 417683 | 45519847 ~ 45520832 (-) |
| LOC118943596 | NA | coding | upstream | 72314 | 46011115 ~ 46028506 (-) |
| ints6 | LOC106582497 | coding | upstream | 180587 | 46119388 ~ 46156972 (-) |
| spopla | spopl | coding | upstream | 931030 | 46869775 ~ 46974132 (-) |
| LOC110501995 | hnmt | coding | upstream | 1103424 | 47042225 ~ 47061327 (-) |
| LOC110501994 | hnmt | coding | upstream | 1148070 | 47086871 ~ 47103828 (-) |
| G1815751 | NA | non-coding | downstream | 4378 | 45933693 ~ 45934137 (-) |
| G1815750 | NA | non-coding | downstream | 6407 | 45931878 ~ 45932108 (-) |
| G1815747 | NA | non-coding | downstream | 9811 | 45928467 ~ 45928704 (-) |
| G1815727 | NA | non-coding | downstream | 43219 | 45895093 ~ 45895296 (-) |
| G1815725 | NA | non-coding | downstream | 47277 | 45890982 ~ 45891238 (-) |
| G1815703 | NA | non-coding | upstream | 3600 | 45942401 ~ 45942920 (-) |
| G1815732 | NA | non-coding | upstream | 23541 | 45962342 ~ 45993213 (-) |
| G1815731 | gbp | non-coding | upstream | 26816 | 45965617 ~ 45996041 (-) |
| G1815772 | NA | non-coding | upstream | 42842 | 45981643 ~ 45982415 (-) |
| G1815781 | NA | non-coding | upstream | 70655 | 46009456 ~ 46009674 (-) |
| G1815615 | LOC106582489 | other | downstream | 97533 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 1264627 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 1385095 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 3260755 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 3333495 | 42603998 ~ 42605768 (-) |
| G1816841 | NA | other | upstream | 1286750 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 1462321 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 1532493 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 2123248 | 48057851 ~ 48064453 (-) |
| G1817668 | NA | other | upstream | 2329986 | 48268787 ~ 48291496 (-) |
