Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815962 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 46169389 ~ 46170144 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: nucleoporin NUP53 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2077547 | True | 658 | lncRNA | 0.40 | 2 | 46169389 | 46170144 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ints6 | LOC106582497 | coding | downstream | 12417 | 46119388 ~ 46156972 (-) |
| LOC118943596 | NA | coding | downstream | 140883 | 46011115 ~ 46028506 (-) |
| LOC110501932 | LOC106582487 | coding | downstream | 442995 | 45702953 ~ 45726394 (-) |
| LOC110501943 | NA | coding | downstream | 581677 | 45582551 ~ 45587712 (-) |
| LOC110501933 | LOC106582484 | coding | downstream | 590483 | 45550854 ~ 45578906 (-) |
| spopla | spopl | coding | upstream | 699687 | 46869775 ~ 46974132 (-) |
| LOC110501995 | hnmt | coding | upstream | 872081 | 47042225 ~ 47061327 (-) |
| LOC110501994 | hnmt | coding | upstream | 916727 | 47086871 ~ 47103828 (-) |
| trpm2 | LOC106582587 | coding | upstream | 1000259 | 47170403 ~ 47260466 (-) |
| cfap65 | cfap65 | coding | upstream | 1307484 | 47476398 ~ 47553609 (-) |
| G1815949 | NA | non-coding | downstream | 38708 | 46130382 ~ 46130681 (-) |
| G1815931 | NA | non-coding | downstream | 52311 | 46089652 ~ 46117078 (-) |
| G1815902 | LOC106582500 | non-coding | downstream | 105057 | 46034114 ~ 46064332 (-) |
| G1815909 | NA | non-coding | downstream | 123491 | 46044335 ~ 46045898 (-) |
| G1815899 | NA | non-coding | downstream | 140462 | 46028573 ~ 46028927 (-) |
| G1815963 | NA | non-coding | upstream | 1745 | 46171889 ~ 46172337 (-) |
| G1815978 | NA | non-coding | upstream | 25619 | 46195763 ~ 46229192 (-) |
| G1816002 | NA | non-coding | upstream | 91729 | 46261873 ~ 46262108 (-) |
| G1816012 | NA | non-coding | upstream | 104372 | 46274516 ~ 46275167 (-) |
| G1816097 | NA | non-coding | upstream | 181909 | 46352053 ~ 46352289 (-) |
| G1815615 | LOC106582489 | other | downstream | 328407 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 1495501 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 1615969 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 3491629 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 3564369 | 42603998 ~ 42605768 (-) |
| G1816841 | NA | other | upstream | 1055407 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 1230978 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 1301150 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 1891905 | 48057851 ~ 48064453 (-) |
| G1817668 | NA | other | upstream | 2098643 | 48268787 ~ 48291496 (-) |
