Gene
RNA
| Item | Value |
|---|---|
| gene id | G1816180 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 46486373 ~ 46486592 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2077797 | True | 220 | lncRNA | 0.50 | 1 | 46486373 | 46486592 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ints6 | LOC106582497 | coding | downstream | 329401 | 46119388 ~ 46156972 (-) |
| LOC118943596 | NA | coding | downstream | 457867 | 46011115 ~ 46028506 (-) |
| LOC110501932 | LOC106582487 | coding | downstream | 759979 | 45702953 ~ 45726394 (-) |
| LOC110501943 | NA | coding | downstream | 898661 | 45582551 ~ 45587712 (-) |
| LOC110501933 | LOC106582484 | coding | downstream | 907467 | 45550854 ~ 45578906 (-) |
| spopla | spopl | coding | upstream | 383239 | 46869775 ~ 46974132 (-) |
| LOC110501995 | hnmt | coding | upstream | 555633 | 47042225 ~ 47061327 (-) |
| LOC110501994 | hnmt | coding | upstream | 600279 | 47086871 ~ 47103828 (-) |
| trpm2 | LOC106582587 | coding | upstream | 683811 | 47170403 ~ 47260466 (-) |
| cfap65 | cfap65 | coding | upstream | 991036 | 47476398 ~ 47553609 (-) |
| G1816153 | NA | non-coding | downstream | 68387 | 46417535 ~ 46417986 (-) |
| G1816143 | NA | non-coding | downstream | 75860 | 46410245 ~ 46410513 (-) |
| G1816131 | LOC106584099 | non-coding | downstream | 86081 | 46399924 ~ 46400292 (-) |
| G1816121 | NA | non-coding | downstream | 92671 | 46373197 ~ 46393702 (-) |
| G1816097 | NA | non-coding | downstream | 134084 | 46352053 ~ 46352289 (-) |
| G1816189 | NA | non-coding | upstream | 6235 | 46492827 ~ 46493793 (-) |
| G1816332 | NA | non-coding | upstream | 51799 | 46538391 ~ 46538623 (-) |
| G1816423 | NA | non-coding | upstream | 209924 | 46696516 ~ 46698947 (-) |
| G1816433 | NA | non-coding | upstream | 224375 | 46710967 ~ 46713006 (-) |
| G1816440 | LOC106582580 | non-coding | upstream | 239703 | 46726295 ~ 46729079 (-) |
| G1815615 | LOC106582489 | other | downstream | 645391 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 1812485 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 1932953 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 3808613 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 3881353 | 42603998 ~ 42605768 (-) |
| G1816841 | NA | other | upstream | 738959 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 914530 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 984702 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 1575457 | 48057851 ~ 48064453 (-) |
| G1817668 | NA | other | upstream | 1782195 | 48268787 ~ 48291496 (-) |
