G1816189


Basic Information

Item Value
gene id G1816189
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 46492827 ~ 46493793 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2077806
TTTTATAGGAAATGAGGGGGGTGTGGTTTTGCCAGGTGTCGAATCTGATTGGTGCATGAGGTGTGCATgcggtgttcatgtgagagaaacGACCGTGGCTTGTCCAATGAGATCGCTTGGCTTTTGGGGAGAGGCGTCTAGTAGTCTGTTATGTGATGGAAAGGCCTCCGTTGTTGATTCCAATGGGGAATTGTATAGGAGAAGTAGAcactttgcttttggggtgctgtttgggttgtgggtgtccgAGAGGTGCCAGGTGAATTTTAAGTAAGACTAGAAGTCCTAGTGGTCAAGAGGAGCCATACGTGGAGTTCCTGTGATTTGTAGAAGTATGATAGATCCTCCTGTAAAAAGTGTGTGTTTGACCTTTGTGTCaccattgacttgtgtgttagcGTTGGGAGCGGTCTGCTCTGGTAGGGGGTTTGGGGTTGGAAATACCCGAAGGTGAGGTTCTGTGGGTCCAGGAAAGGTAGAGGGTAGAGTGGACCTCTGTGGGTTCCTGTAGAATTTTTAGTTGGGGTTCTGGGTGACCCATAGGTCTGGTTATAGGTCTTTGAATGTGGTTGAGTTATTTTTTCCTCCGATTTTTGTGGAGTCACGTTTACTCATATGTAGTAAGGTGCGATGTGCAGGGAGAAGTAGTGGCCGTGGTTTTTTGGTCTTTTTGTGGTGTTGGAGGGCTTAAACCTTGTTCCTTTATTGAGGGGTAGTTGCAGGTAGGGTTACTAGGGGGGTGTTCCTTTTACCCGGATCGAGAATGCTGCTGTCTTTATCTTTTCTAGTTGGCGCTTATTAGCGGAGTTTTAGCTTTGATCGCGTTCCTGTCCACTTGGGTTCCCGGATATGCGGTAGATTTGGCCGTTTGGCTGTGTTCAAGTCCACTTGGATTATGGGATGTACGGATCCGAAATAACTTTTTTTatgctgtttccagtgatgtgtgtcctccggaGTTGATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2077806 True 967 lncRNA 0.47 1 46492827 46493793

Neighbor

gene id symbol gene type direction distance location
ints6 LOC106582497 coding downstream 335855 46119388 ~ 46156972 (-)
LOC118943596 NA coding downstream 464321 46011115 ~ 46028506 (-)
LOC110501932 LOC106582487 coding downstream 766433 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 905115 45582551 ~ 45587712 (-)
LOC110501933 LOC106582484 coding downstream 913921 45550854 ~ 45578906 (-)
spopla spopl coding upstream 376038 46869775 ~ 46974132 (-)
LOC110501995 hnmt coding upstream 548432 47042225 ~ 47061327 (-)
LOC110501994 hnmt coding upstream 593078 47086871 ~ 47103828 (-)
trpm2 LOC106582587 coding upstream 676610 47170403 ~ 47260466 (-)
cfap65 cfap65 coding upstream 983835 47476398 ~ 47553609 (-)
G1816180 NA non-coding downstream 6235 46486373 ~ 46486592 (-)
G1816153 NA non-coding downstream 74841 46417535 ~ 46417986 (-)
G1816143 NA non-coding downstream 82314 46410245 ~ 46410513 (-)
G1816131 LOC106584099 non-coding downstream 92535 46399924 ~ 46400292 (-)
G1816121 NA non-coding downstream 99125 46373197 ~ 46393702 (-)
G1816332 NA non-coding upstream 44598 46538391 ~ 46538623 (-)
G1816423 NA non-coding upstream 202723 46696516 ~ 46698947 (-)
G1816433 NA non-coding upstream 217174 46710967 ~ 46713006 (-)
G1816440 LOC106582580 non-coding upstream 232502 46726295 ~ 46729079 (-)
G1816441 NA non-coding upstream 235913 46729706 ~ 46729953 (-)
G1815615 LOC106582489 other downstream 651845 45838750 ~ 45840982 (-)
G1814480 NA other downstream 1818939 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 1939407 44473683 ~ 44553607 (-)
G1812404 NA other downstream 3815067 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 3887807 42603998 ~ 42605768 (-)
G1816841 NA other upstream 731758 47225551 ~ 47226646 (-)
G1816929 NA other upstream 907329 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 977501 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 1568256 48057851 ~ 48064453 (-)
G1817668 NA other upstream 1774994 48268787 ~ 48291496 (-)

Expression


Co-expression Network